Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 AC104115.1-201ENST00000484005 623 ntBASIC13.59□□□□□ -0.23
TTC30AQ86WT1 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 MYL6-210ENST00000548400 573 ntTSL 3 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 AC023830.3-201ENST00000612995 1455 ntBASIC13.59□□□□□ -0.23
TTC30AQ86WT1 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 DCAKD-202ENST00000342350 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 DCAKD-203ENST00000452796 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 AL050341.2-201ENST00000567508 1541 ntBASIC13.59□□□□□ -0.23
TTC30AQ86WT1 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TTC30AQ86WT1 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TTC30AQ86WT1 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TTC30AQ86WT1 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.23
TTC30AQ86WT1 AP001972.5-201ENST00000624624 2338 ntBASIC13.58□□□□□ -0.23
TTC30AQ86WT1 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TTC30AQ86WT1 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC13.58□□□□□ -0.23
TTC30AQ86WT1 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
TTC30AQ86WT1 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 AC000077.1-201ENST00000420012 953 ntBASIC13.58□□□□□ -0.24
TTC30AQ86WT1 MAGEA7P-201ENST00000436482 942 ntBASIC13.58□□□□□ -0.24
TTC30AQ86WT1 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 AC104435.2-201ENST00000478745 866 ntTSL 3 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 SMUG1-AS1-201ENST00000634796 1734 ntTSL 5 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 CETP-202ENST00000379780 1537 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 SFPQP1-201ENST00000446621 1786 ntBASIC13.58□□□□□ -0.24
TTC30AQ86WT1 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 THEMIS3P-201ENST00000416112 1586 ntBASIC13.58□□□□□ -0.24
TTC30AQ86WT1 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TTC30AQ86WT1 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 GJB1-202ENST00000374022 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 MPI-208ENST00000563786 1707 ntTSL 5 BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TTC30AQ86WT1 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms