Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC13.68□□□□□ -0.22
O00370 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC13.68□□□□□ -0.22
O00370 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 AC053503.6-201ENST00000623864 1843 ntBASIC13.68□□□□□ -0.22
O00370 ELP4-225ENST00000640533 1801 ntTSL 5 BASIC13.68□□□□□ -0.22
O00370 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
O00370 FRMD6-204ENST00000553556 1679 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC13.68□□□□□ -0.22
O00370 EME1-201ENST00000338165 2339 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
O00370 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
O00370 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 AC025538.1-201ENST00000510707 1486 ntBASIC13.67□□□□□ -0.22
O00370 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC13.67□□□□□ -0.22
O00370 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC13.67□□□□□ -0.22
O00370 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC13.67□□□□□ -0.22
O00370 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
O00370 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC13.67□□□□□ -0.22
O00370 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC13.67□□□□□ -0.22
O00370 AC099344.2-201ENST00000430897 1061 ntTSL 2 BASIC13.67□□□□□ -0.22
O00370 AGPAT5P1-201ENST00000455855 1019 ntBASIC13.67□□□□□ -0.22
O00370 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC13.67□□□□□ -0.22
O00370 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC13.67□□□□□ -0.22
O00370 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
O00370 BMF-206ENST00000558774 671 ntTSL 3 BASIC13.67□□□□□ -0.22
O00370 AC120498.7-201ENST00000562876 330 ntBASIC13.67□□□□□ -0.22
O00370 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.67□□□□□ -0.22
O00370 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC13.67□□□□□ -0.22
O00370 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC13.67□□□□□ -0.22
O00370 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC13.67□□□□□ -0.22
O00370 AC136475.7-201ENST00000602949 592 ntBASIC13.67□□□□□ -0.22
O00370 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
O00370 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
O00370 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
O00370 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 ALOX15P2-201ENST00000340858 1897 ntBASIC13.67□□□□□ -0.22
O00370 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
O00370 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
O00370 AC009108.4-201ENST00000623284 2451 ntBASIC13.67□□□□□ -0.22
O00370 DDO-201ENST00000368923 1953 ntTSL 2 BASIC13.67□□□□□ -0.22
O00370 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
O00370 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC13.67□□□□□ -0.22
O00370 SNAP25-201ENST00000254976 2053 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
O00370 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC13.66□□□□□ -0.22
O00370 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC13.66□□□□□ -0.22
O00370 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
O00370 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
O00370 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 NBPF17P-201ENST00000401087 2119 ntBASIC13.66□□□□□ -0.22
O00370 AC120024.4-201ENST00000624285 2143 ntBASIC13.66□□□□□ -0.22
O00370 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.66□□□□□ -0.22
O00370 CETP-202ENST00000379780 1537 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 PKMP1-201ENST00000455804 1523 ntBASIC13.66□□□□□ -0.22
O00370 AC073488.1-201ENST00000416620 1600 ntBASIC13.66□□□□□ -0.22
O00370 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC13.66□□□□□ -0.22
O00370 PARK7-204ENST00000377493 795 ntTSL 2 BASIC13.66□□□□□ -0.22
O00370 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
O00370 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC13.66□□□□□ -0.22
O00370 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 OARD1-214ENST00000486443 764 ntTSL 3 BASIC13.66□□□□□ -0.22
O00370 AC010395.2-201ENST00000509899 904 ntBASIC13.66□□□□□ -0.22
O00370 GNGT2-204ENST00000511277 918 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
O00370 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC13.66□□□□□ -0.22
O00370 GRAMD4P6-201ENST00000556999 244 ntBASIC13.66□□□□□ -0.22
O00370 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
O00370 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC13.66□□□□□ -0.22
O00370 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC13.66□□□□□ -0.22
O00370 AL591424.3-201ENST00000614278 872 ntBASIC13.66□□□□□ -0.22
O00370 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC13.66□□□□□ -0.22
O00370 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC13.66□□□□□ -0.22
O00370 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms