Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 AL590683.1-201ENST00000439059 1849 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 FOXD2-AS1-201ENST00000445551 2509 ntBASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
PRICKLE4Q2TBC4 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 POM121L1P-202ENST00000605258 1835 ntBASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 TBC1D31-201ENST00000287380 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 HMGB3P4-201ENST00000428776 514 ntBASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 CYP2F2P-201ENST00000437853 1056 ntBASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 PMEL-201ENST00000449260 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 KRT18P66-201ENST00000452970 1269 ntBASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 PTK2-225ENST00000520892 571 ntTSL 4 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 IGHEP1-201ENST00000521393 651 ntBASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 MASP2-201ENST00000400897 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 VIPAS39-206ENST00000553888 2934 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 PIMREG-206ENST00000572595 1551 ntTSL 3 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 TPRX1-203ENST00000543508 1526 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 ZC3HC1-203ENST00000360708 1676 ntTSL 2 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 AC009549.1-201ENST00000603468 1686 ntBASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
PRICKLE4Q2TBC4 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 TMEM106B-202ENST00000396668 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 LINC01442-202ENST00000618872 1600 ntTSL 2 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
PRICKLE4Q2TBC4 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms