Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGB3Q9Y5G1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGB3Q9Y5G1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 MIR4466-201ENST00000606121 54 ntBASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 PKD1P6-201ENST00000343738 4769 ntBASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 AC009102.2-201ENST00000606772 1639 ntBASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB3Q9Y5G1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PCDHGB3Q9Y5G1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PCDHGB3Q9Y5G1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDHGB3Q9Y5G1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
PCDHGB3Q9Y5G1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGB3Q9Y5G1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
PCDHGB3Q9Y5G1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGB3Q9Y5G1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHGB3Q9Y5G1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB3Q9Y5G1 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGB3Q9Y5G1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB3Q9Y5G1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHGB3Q9Y5G1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB3Q9Y5G1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGB3Q9Y5G1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB3Q9Y5G1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PCDHGB3Q9Y5G1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGB3Q9Y5G1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB3Q9Y5G1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGB3Q9Y5G1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB3Q9Y5G1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB3Q9Y5G1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB3Q9Y5G1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB3Q9Y5G1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB3Q9Y5G1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGB3Q9Y5G1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PCDHGB3Q9Y5G1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGB3Q9Y5G1 MIR638-201ENST00000385237 100 ntBASIC20.68■□□□□ 0.9
PCDHGB3Q9Y5G1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGB3Q9Y5G1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PCDHGB3Q9Y5G1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHGB3Q9Y5G1 AC133561.4-201ENST00000566112 224 ntBASIC20.68■□□□□ 0.9
PCDHGB3Q9Y5G1 DUX4L4-201ENST00000566884 1269 ntBASIC20.68■□□□□ 0.9
PCDHGB3Q9Y5G1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGB3Q9Y5G1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PCDHGB3Q9Y5G1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PCDHGB3Q9Y5G1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHGB3Q9Y5G1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHGB3Q9Y5G1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB3Q9Y5G1 AC009086.3-201ENST00000623486 1008 ntBASIC20.67■□□□□ 0.9
PCDHGB3Q9Y5G1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB3Q9Y5G1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB3Q9Y5G1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB3Q9Y5G1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGB3Q9Y5G1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB3Q9Y5G1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 C17orf82-201ENST00000623772 1530 ntBASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGB3Q9Y5G1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB3Q9Y5G1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB3Q9Y5G1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB3Q9Y5G1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGB3Q9Y5G1 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.64■□□□□ 0.89
PCDHGB3Q9Y5G1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms