Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20■□□□□ 0.79
RPH3AQ9Y2J0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RPH3AQ9Y2J0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
RPH3AQ9Y2J0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20■□□□□ 0.79
RPH3AQ9Y2J0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20■□□□□ 0.79
RPH3AQ9Y2J0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RPH3AQ9Y2J0 CA15P2-201ENST00000611168 834 ntBASIC20■□□□□ 0.79
RPH3AQ9Y2J0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
RPH3AQ9Y2J0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPH3AQ9Y2J0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RPH3AQ9Y2J0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPH3AQ9Y2J0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPH3AQ9Y2J0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RPH3AQ9Y2J0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPH3AQ9Y2J0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RPH3AQ9Y2J0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
RPH3AQ9Y2J0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.99■□□□□ 0.79
RPH3AQ9Y2J0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPH3AQ9Y2J0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPH3AQ9Y2J0 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.99■□□□□ 0.79
RPH3AQ9Y2J0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.99■□□□□ 0.79
RPH3AQ9Y2J0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPH3AQ9Y2J0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.99■□□□□ 0.79
RPH3AQ9Y2J0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPH3AQ9Y2J0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPH3AQ9Y2J0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 RASA4CP-201ENST00000424092 1398 ntBASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 OR2I1P-207ENST00000453522 948 ntBASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.98■□□□□ 0.79
RPH3AQ9Y2J0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 AC105265.2-201ENST00000467189 838 ntBASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 AC068473.5-201ENST00000616428 2072 ntBASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPH3AQ9Y2J0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 C9orf163-202ENST00000624034 2573 ntBASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 AC133561.1-201ENST00000568600 2415 ntBASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 AC012676.1-201ENST00000574705 1949 ntBASIC19.96■□□□□ 0.79
RPH3AQ9Y2J0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RPH3AQ9Y2J0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPH3AQ9Y2J0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPH3AQ9Y2J0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPH3AQ9Y2J0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.78
RPH3AQ9Y2J0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPH3AQ9Y2J0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.95■□□□□ 0.78
RPH3AQ9Y2J0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPH3AQ9Y2J0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RPH3AQ9Y2J0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RPH3AQ9Y2J0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.94■□□□□ 0.78
RPH3AQ9Y2J0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPH3AQ9Y2J0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPH3AQ9Y2J0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RPH3AQ9Y2J0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPH3AQ9Y2J0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RPH3AQ9Y2J0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms