Protein–RNA interactions for Protein: Q9UQV4

LAMP3, Lysosome-associated membrane glycoprotein 3, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3Q9UQV4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LAMP3Q9UQV4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LAMP3Q9UQV4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LAMP3Q9UQV4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LAMP3Q9UQV4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LAMP3Q9UQV4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LAMP3Q9UQV4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMP3Q9UQV4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LAMP3Q9UQV4 AC004812.2-201ENST00000611079 2094 ntBASIC18.96■□□□□ 0.63
LAMP3Q9UQV4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMP3Q9UQV4 DUSP8P5-201ENST00000422884 1815 ntBASIC18.96■□□□□ 0.63
LAMP3Q9UQV4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMP3Q9UQV4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMP3Q9UQV4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LAMP3Q9UQV4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.96■□□□□ 0.63
LAMP3Q9UQV4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMP3Q9UQV4 RARRES2P11-201ENST00000635158 484 ntBASIC18.96■□□□□ 0.63
LAMP3Q9UQV4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMP3Q9UQV4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LAMP3Q9UQV4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 AC090192.1-201ENST00000517740 490 ntBASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 CCDC92B-201ENST00000575506 885 ntBASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LAMP3Q9UQV4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 AC079834.2-201ENST00000609776 1949 ntBASIC18.94■□□□□ 0.62
LAMP3Q9UQV4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LAMP3Q9UQV4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.92■□□□□ 0.62
LAMP3Q9UQV4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LAMP3Q9UQV4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LAMP3Q9UQV4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.92■□□□□ 0.62
LAMP3Q9UQV4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LAMP3Q9UQV4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LAMP3Q9UQV4 AP005435.1-201ENST00000529293 1178 ntBASIC18.92■□□□□ 0.62
LAMP3Q9UQV4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LAMP3Q9UQV4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.92■□□□□ 0.62
LAMP3Q9UQV4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LAMP3Q9UQV4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LAMP3Q9UQV4 LINC02228-203ENST00000641970 1355 ntBASIC18.92■□□□□ 0.62
LAMP3Q9UQV4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LAMP3Q9UQV4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMP3Q9UQV4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LAMP3Q9UQV4 CLDN5-201ENST00000403084 2357 ntBASIC18.91■□□□□ 0.62
LAMP3Q9UQV4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMP3Q9UQV4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.91■□□□□ 0.62
LAMP3Q9UQV4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LAMP3Q9UQV4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.91■□□□□ 0.62
LAMP3Q9UQV4 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.91■□□□□ 0.62
LAMP3Q9UQV4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms