Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COMMD3Q9UBI1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.24■□□□□ 0.67
COMMD3Q9UBI1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COMMD3Q9UBI1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD3Q9UBI1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD3Q9UBI1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD3Q9UBI1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD3Q9UBI1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.23■□□□□ 0.67
COMMD3Q9UBI1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD3Q9UBI1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD3Q9UBI1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COMMD3Q9UBI1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
COMMD3Q9UBI1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD3Q9UBI1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
COMMD3Q9UBI1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD3Q9UBI1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
COMMD3Q9UBI1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD3Q9UBI1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
COMMD3Q9UBI1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD3Q9UBI1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD3Q9UBI1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD3Q9UBI1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD3Q9UBI1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COMMD3Q9UBI1 AL157384.1-201ENST00000445995 2473 ntBASIC19.22■□□□□ 0.67
COMMD3Q9UBI1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD3Q9UBI1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD3Q9UBI1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD3Q9UBI1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COMMD3Q9UBI1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD3Q9UBI1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.21■□□□□ 0.67
COMMD3Q9UBI1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD3Q9UBI1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD3Q9UBI1 AC022413.1-201ENST00000624602 984 ntBASIC19.21■□□□□ 0.67
COMMD3Q9UBI1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD3Q9UBI1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.21■□□□□ 0.67
COMMD3Q9UBI1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
COMMD3Q9UBI1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.2■□□□□ 0.66
COMMD3Q9UBI1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD3Q9UBI1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD3Q9UBI1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COMMD3Q9UBI1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.19■□□□□ 0.66
COMMD3Q9UBI1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COMMD3Q9UBI1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
COMMD3Q9UBI1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD3Q9UBI1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD3Q9UBI1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3Q9UBI1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3Q9UBI1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3Q9UBI1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.18■□□□□ 0.66
COMMD3Q9UBI1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3Q9UBI1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.18■□□□□ 0.66
COMMD3Q9UBI1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3Q9UBI1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3Q9UBI1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3Q9UBI1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3Q9UBI1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3Q9UBI1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3Q9UBI1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 AC244015.2-201ENST00000616358 1861 ntBASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3Q9UBI1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms