Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF304Q9HCX3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF304Q9HCX3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF304Q9HCX3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF304Q9HCX3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF304Q9HCX3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
ZNF304Q9HCX3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF304Q9HCX3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.75■□□□□ 0.91
ZNF304Q9HCX3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.75■□□□□ 0.91
ZNF304Q9HCX3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.75■□□□□ 0.91
ZNF304Q9HCX3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF304Q9HCX3 AC087239.1-201ENST00000622671 572 ntBASIC20.75■□□□□ 0.91
ZNF304Q9HCX3 AL358852.1-201ENST00000623174 1268 ntBASIC20.75■□□□□ 0.91
ZNF304Q9HCX3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF304Q9HCX3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF304Q9HCX3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF304Q9HCX3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF304Q9HCX3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF304Q9HCX3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF304Q9HCX3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF304Q9HCX3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF304Q9HCX3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF304Q9HCX3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF304Q9HCX3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF304Q9HCX3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF304Q9HCX3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 DUSP8P3-201ENST00000399571 1760 ntBASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 AC097381.1-201ENST00000429019 1296 ntBASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 AL354811.1-201ENST00000610286 706 ntBASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 MIR6821-201ENST00000617625 74 ntBASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 AL031602.1-201ENST00000633169 911 ntBASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF304Q9HCX3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ZNF304Q9HCX3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF304Q9HCX3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF304Q9HCX3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF304Q9HCX3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF304Q9HCX3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF304Q9HCX3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF304Q9HCX3 AC012414.1-201ENST00000556676 535 ntBASIC20.72■□□□□ 0.91
ZNF304Q9HCX3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF304Q9HCX3 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF304Q9HCX3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ZNF304Q9HCX3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF304Q9HCX3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF304Q9HCX3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF304Q9HCX3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF304Q9HCX3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF304Q9HCX3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
ZNF304Q9HCX3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF304Q9HCX3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF304Q9HCX3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.71■□□□□ 0.91
ZNF304Q9HCX3 AC010141.3-201ENST00000456659 717 ntBASIC20.71■□□□□ 0.91
ZNF304Q9HCX3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.71■□□□□ 0.91
ZNF304Q9HCX3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF304Q9HCX3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.71■□□□□ 0.91
ZNF304Q9HCX3 MIR5787-201ENST00000611784 55 ntBASIC20.71■□□□□ 0.91
ZNF304Q9HCX3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF304Q9HCX3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF304Q9HCX3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF304Q9HCX3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ZNF304Q9HCX3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF304Q9HCX3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.7■□□□□ 0.9
ZNF304Q9HCX3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF304Q9HCX3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.7■□□□□ 0.9
ZNF304Q9HCX3 AC105233.4-201ENST00000642045 216 ntBASIC20.7■□□□□ 0.9
ZNF304Q9HCX3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF304Q9HCX3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF304Q9HCX3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.7■□□□□ 0.9
ZNF304Q9HCX3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
ZNF304Q9HCX3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF304Q9HCX3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF304Q9HCX3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms