Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.65■□□□□ 0.58
MED28Q9H204 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MED28Q9H204 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MED28Q9H204 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.64■□□□□ 0.58
MED28Q9H204 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MED28Q9H204 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.64■□□□□ 0.57
MED28Q9H204 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.64■□□□□ 0.57
MED28Q9H204 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.64■□□□□ 0.57
MED28Q9H204 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MED28Q9H204 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
MED28Q9H204 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MED28Q9H204 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
MED28Q9H204 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MED28Q9H204 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MED28Q9H204 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MED28Q9H204 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MED28Q9H204 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MED28Q9H204 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MED28Q9H204 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MED28Q9H204 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MED28Q9H204 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MED28Q9H204 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.63■□□□□ 0.57
MED28Q9H204 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
MED28Q9H204 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MED28Q9H204 AC138932.1-201ENST00000534164 6830 ntBASIC18.63■□□□□ 0.57
MED28Q9H204 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.63■□□□□ 0.57
MED28Q9H204 MIR3665-201ENST00000578708 105 ntBASIC18.63■□□□□ 0.57
MED28Q9H204 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MED28Q9H204 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
MED28Q9H204 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MED28Q9H204 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MED28Q9H204 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MED28Q9H204 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MED28Q9H204 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MED28Q9H204 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.62■□□□□ 0.57
MED28Q9H204 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.62■□□□□ 0.57
MED28Q9H204 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MED28Q9H204 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MED28Q9H204 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MED28Q9H204 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MED28Q9H204 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MED28Q9H204 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MED28Q9H204 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MED28Q9H204 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.62■□□□□ 0.57
MED28Q9H204 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MED28Q9H204 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MED28Q9H204 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MED28Q9H204 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.61■□□□□ 0.57
MED28Q9H204 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MED28Q9H204 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.61■□□□□ 0.57
MED28Q9H204 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MED28Q9H204 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MED28Q9H204 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MED28Q9H204 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.61■□□□□ 0.57
MED28Q9H204 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.61■□□□□ 0.57
MED28Q9H204 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MED28Q9H204 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MED28Q9H204 AC087742.1-201ENST00000575880 1738 ntBASIC18.6■□□□□ 0.57
MED28Q9H204 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MED28Q9H204 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MED28Q9H204 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MED28Q9H204 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MED28Q9H204 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.6■□□□□ 0.57
MED28Q9H204 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MED28Q9H204 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MED28Q9H204 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.6■□□□□ 0.57
MED28Q9H204 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MED28Q9H204 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.6■□□□□ 0.57
MED28Q9H204 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.6■□□□□ 0.57
MED28Q9H204 AF106564.1-201ENST00000607058 2553 ntBASIC18.6■□□□□ 0.57
MED28Q9H204 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
MED28Q9H204 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.6■□□□□ 0.57
MED28Q9H204 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MED28Q9H204 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MED28Q9H204 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MED28Q9H204 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MED28Q9H204 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MED28Q9H204 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MED28Q9H204 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MED28Q9H204 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MED28Q9H204 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.59■□□□□ 0.57
MED28Q9H204 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MED28Q9H204 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.59■□□□□ 0.57
MED28Q9H204 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.59■□□□□ 0.57
MED28Q9H204 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.59■□□□□ 0.57
MED28Q9H204 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MED28Q9H204 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
MED28Q9H204 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MED28Q9H204 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MED28Q9H204 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MED28Q9H204 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.59■□□□□ 0.57
MED28Q9H204 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MED28Q9H204 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MED28Q9H204 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
MED28Q9H204 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MED28Q9H204 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MED28Q9H204 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MED28Q9H204 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
MED28Q9H204 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MED28Q9H204 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms