Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC9.87□□□□□ -0.836e-20■■■■□ 24.1
CSTF2TQ9H0L4 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.986e-20■■■■□ 24.1
CSTF2TQ9H0L4 ITIH2-206ENST00000480387 573 ntTSL 37.46□□□□□ -1.226e-20■■■■□ 24.1
CSTF2TQ9H0L4 ITIH2-203ENST00000429820 767 ntTSL 37.07□□□□□ -1.286e-20■■■■□ 24.1
CSTF2TQ9H0L4 RASGRP2-213ENST00000421556 2168 ntTSL 220.51■□□□□ 0.872e-7■■■■□ 24
CSTF2TQ9H0L4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.11■□□□□ 0.812e-7■■■■□ 24
CSTF2TQ9H0L4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.542e-7■■■■□ 24
CSTF2TQ9H0L4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.13■■□□□ 1.611e-6■■■■□ 24
CSTF2TQ9H0L4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.141e-6■■■■□ 24
CSTF2TQ9H0L4 INPP5A-204ENST00000423490 416 ntTSL 55.14□□□□□ -1.598e-7■■■■□ 24
CSTF2TQ9H0L4 HPCAL1-205ENST00000423674 586 ntTSL 421.47■■□□□ 1.032e-7■■■■□ 24
CSTF2TQ9H0L4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.622e-7■■■■□ 24
CSTF2TQ9H0L4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.152e-7■■■■□ 24
CSTF2TQ9H0L4 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.667e-7■■■■□ 24
CSTF2TQ9H0L4 HOOK3-204ENST00000527306 2325 ntTSL 1 (best)19.65■□□□□ 0.744e-7■■■■□ 24
CSTF2TQ9H0L4 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.14e-7■■■■□ 24
CSTF2TQ9H0L4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.392e-6■■■■□ 24
CSTF2TQ9H0L4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.61■□□□□ 0.252e-6■■■■□ 24
CSTF2TQ9H0L4 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.512e-6■■■■□ 24
CSTF2TQ9H0L4 GLB1-215ENST00000482097 547 ntTSL 57.7□□□□□ -1.182e-6■■■■□ 24
CSTF2TQ9H0L4 GLB1-216ENST00000485698 550 ntTSL 47.7□□□□□ -1.182e-6■■■■□ 24
CSTF2TQ9H0L4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.551e-6■■■■□ 24
CSTF2TQ9H0L4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.443e-11■■■■□ 24
CSTF2TQ9H0L4 UNKL-213ENST00000513783 582 ntTSL 413.3□□□□□ -0.282e-9■■■■□ 24
CSTF2TQ9H0L4 MBOAT7-214ENST00000495968 465 ntTSL 524.47■■□□□ 1.513e-7■■■■□ 24
CSTF2TQ9H0L4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.98■■□□□ 1.433e-7■■■■□ 24
CSTF2TQ9H0L4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.56■■□□□ 1.043e-7■■■■□ 24
CSTF2TQ9H0L4 SPHK2-203ENST00000426514 1493 ntTSL 1 (best)20.83■□□□□ 0.933e-7■■■■□ 24
CSTF2TQ9H0L4 LINC01881-207ENST00000622435 555 ntTSL 519.98■□□□□ 0.793e-7■■■■□ 24
CSTF2TQ9H0L4 MBOAT7-204ENST00000414665 876 ntTSL 219.24■□□□□ 0.673e-7■■■■□ 24
CSTF2TQ9H0L4 LINC01881-204ENST00000444990 557 ntTSL 319.21■□□□□ 0.673e-7■■■■□ 24
CSTF2TQ9H0L4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.613e-7■■■■□ 24
CSTF2TQ9H0L4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.78■□□□□ 0.63e-7■■■■□ 24
CSTF2TQ9H0L4 MBOAT7-210ENST00000474910 629 ntTSL 218.15■□□□□ 0.53e-7■■■■□ 24
CSTF2TQ9H0L4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.493e-7■■■■□ 24
CSTF2TQ9H0L4 SPHK2-212ENST00000601704 565 ntTSL 217.87■□□□□ 0.453e-7■■■■□ 24
CSTF2TQ9H0L4 SPHK2-205ENST00000597434 1542 ntAPPRIS ALT2 TSL 217.37■□□□□ 0.373e-7■■■■□ 24
CSTF2TQ9H0L4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.03■□□□□ 0.321e-13■■■■□ 24
CSTF2TQ9H0L4 SPHK2-209ENST00000599033 618 ntTSL 316.88■□□□□ 0.293e-7■■■■□ 24
CSTF2TQ9H0L4 LINC01881-202ENST00000431796 565 ntTSL 416.86■□□□□ 0.293e-7■■■■□ 24
CSTF2TQ9H0L4 MBOAT7-211ENST00000491216 564 ntTSL 216.26■□□□□ 0.193e-7■■■■□ 24
CSTF2TQ9H0L4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -03e-7■■■■□ 24
CSTF2TQ9H0L4 ZXDC-204ENST00000515545 2635 ntTSL 1 (best)14.76□□□□□ -0.053e-7■■■■□ 24
CSTF2TQ9H0L4 SPHK2-204ENST00000593308 713 ntTSL 314.54□□□□□ -0.083e-7■■■■□ 24
CSTF2TQ9H0L4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.45□□□□□ -0.13e-7■■■■□ 24
CSTF2TQ9H0L4 ZXDC-203ENST00000514463 4639 ntTSL 1 (best)13.8□□□□□ -0.23e-7■■■■□ 24
CSTF2TQ9H0L4 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.313e-7■■■■□ 24
CSTF2TQ9H0L4 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.313e-7■■■■□ 24
CSTF2TQ9H0L4 MBOAT7-208ENST00000453320 557 ntTSL 412.29□□□□□ -0.443e-7■■■■□ 24
CSTF2TQ9H0L4 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC11.18□□□□□ -0.622e-6■■■■□ 24
CSTF2TQ9H0L4 RPL17-224ENST00000618619 747 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.832e-6■■■■□ 24
CSTF2TQ9H0L4 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.982e-6■■■■□ 24
CSTF2TQ9H0L4 RPL17-C18orf32-202ENST00000577910 1012 ntTSL 56.63□□□□□ -1.352e-6■■■■□ 24
CSTF2TQ9H0L4 CRIP2-207ENST00000548989 1976 ntTSL 216.82■□□□□ 0.288e-7■■■■□ 24
CSTF2TQ9H0L4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.13e-6■■■■□ 24
CSTF2TQ9H0L4 DPM2-205ENST00000495270 1662 ntTSL 1 (best)15.42■□□□□ 0.063e-6■■■■□ 24
CSTF2TQ9H0L4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.92■□□□□ 0.39e-7■■■■□ 24
CSTF2TQ9H0L4 ARHGEF16-205ENST00000445297 836 ntTSL 321.41■■□□□ 1.022e-6■■■■□ 24
CSTF2TQ9H0L4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.97■□□□□ 0.152e-6■■■■□ 24
CSTF2TQ9H0L4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.47□□□□□ -0.092e-6■■■■□ 24
CSTF2TQ9H0L4 FOXN3-210ENST00000555658 648 ntTSL 35.57□□□□□ -1.523e-12■■■■□ 24
CSTF2TQ9H0L4 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC10.63□□□□□ -0.717e-7■■■■□ 24
CSTF2TQ9H0L4 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC9.7□□□□□ -0.867e-7■■■■□ 24
CSTF2TQ9H0L4 TRMT2A-209ENST00000463710 757 ntTSL 316.12■□□□□ 0.175e-8■■■■□ 24
CSTF2TQ9H0L4 TRMT2A-212ENST00000471040 848 ntTSL 316.12■□□□□ 0.175e-8■■■■□ 24
CSTF2TQ9H0L4 TRMT2A-217ENST00000488335 379 ntTSL 315.39■□□□□ 0.055e-8■■■■□ 24
CSTF2TQ9H0L4 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.65□□□□□ -0.386e-9■■■■□ 24
CSTF2TQ9H0L4 BDH1-214ENST00000479425 1144 ntTSL 212.44□□□□□ -0.422e-7■■■■□ 23.9
CSTF2TQ9H0L4 BDH1-206ENST00000434143 659 ntTSL 311.22□□□□□ -0.612e-7■■■■□ 23.9
CSTF2TQ9H0L4 BDH1-213ENST00000477015 595 ntTSL 29.85□□□□□ -0.832e-7■■■■□ 23.9
CSTF2TQ9H0L4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.97□□□□□ -1.611e-10■■■■□ 23.9
CSTF2TQ9H0L4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.383e-10■■■■□ 23.9
CSTF2TQ9H0L4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.291e-6■■■■□ 23.9
CSTF2TQ9H0L4 HDGF-209ENST00000495212 744 ntTSL 318.84■□□□□ 0.611e-6■■■■□ 23.9
CSTF2TQ9H0L4 HDGF-205ENST00000469145 844 ntTSL 218.31■□□□□ 0.521e-6■■■■□ 23.9
CSTF2TQ9H0L4 ARHGEF2-216ENST00000495070 571 ntTSL 415.68■□□□□ 0.13e-7■■■■□ 23.9
CSTF2TQ9H0L4 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.34□□□□□ -0.433e-7■■■■□ 23.9
CSTF2TQ9H0L4 ARHGEF2-214ENST00000477754 883 ntTSL 56.74□□□□□ -1.333e-7■■■■□ 23.9
CSTF2TQ9H0L4 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.87e-7■■■■□ 23.9
CSTF2TQ9H0L4 UNKL-214ENST00000515195 481 ntTSL 414.17□□□□□ -0.142e-9■■■■□ 23.9
CSTF2TQ9H0L4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.54□□□□□ -0.245e-12■■■■□ 23.9
CSTF2TQ9H0L4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.24□□□□□ -0.295e-12■■■■□ 23.9
CSTF2TQ9H0L4 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.1□□□□□ -0.315e-12■■■■□ 23.9
CSTF2TQ9H0L4 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.09□□□□□ -0.475e-12■■■■□ 23.9
CSTF2TQ9H0L4 RAP1GAP-207ENST00000447293 429 ntTSL 210.9□□□□□ -0.669e-8■■■■□ 23.9
CSTF2TQ9H0L4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.921e-6■■■■□ 23.9
CSTF2TQ9H0L4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.081e-6■■■■□ 23.9
CSTF2TQ9H0L4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.131e-6■■■■□ 23.9
CSTF2TQ9H0L4 STRN4-215ENST00000597063 570 ntTSL 417.01■□□□□ 0.311e-7■■■■□ 23.9
CSTF2TQ9H0L4 AL356356.1-201ENST00000442435 665 ntTSL 5 BASIC10.16□□□□□ -0.781e-6■■■■□ 23.9
CSTF2TQ9H0L4 ARHGEF2-211ENST00000471589 892 ntTSL 510.59□□□□□ -0.713e-7■■■■□ 23.9
CSTF2TQ9H0L4 ARHGEF2-207ENST00000465079 693 ntTSL 210.23□□□□□ -0.773e-7■■■■□ 23.9
CSTF2TQ9H0L4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.265e-9■■■■□ 23.9
CSTF2TQ9H0L4 PLEC-213ENST00000528025 2115 ntTSL 517.84■□□□□ 0.455e-7■■■■□ 23.9
CSTF2TQ9H0L4 PLEC-215ENST00000532346 316 ntTSL 314.46□□□□□ -0.095e-7■■■■□ 23.9
CSTF2TQ9H0L4 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.456e-7■■■■□ 23.9
CSTF2TQ9H0L4 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.555e-7■■■■□ 23.9
CSTF2TQ9H0L4 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.655e-7■■■■□ 23.9
CSTF2TQ9H0L4 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC10.41□□□□□ -0.745e-7■■■■□ 23.9
CSTF2TQ9H0L4 MROH1-208ENST00000532255 3905 ntTSL 211.07□□□□□ -0.645e-7■■■■□ 23.9
Retrieved 100 of 19,151 protein–RNA pairs in 199.9 ms