Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.33■□□□□ 0.68
SLIRPQ9GZT3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLIRPQ9GZT3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLIRPQ9GZT3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLIRPQ9GZT3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SLIRPQ9GZT3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 AC093536.1-201ENST00000569153 554 ntBASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SLIRPQ9GZT3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.31■□□□□ 0.68
SLIRPQ9GZT3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 FEM1AP1-201ENST00000431297 1995 ntBASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.3■□□□□ 0.68
SLIRPQ9GZT3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLIRPQ9GZT3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLIRPQ9GZT3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.29■□□□□ 0.68
SLIRPQ9GZT3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLIRPQ9GZT3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.29■□□□□ 0.68
SLIRPQ9GZT3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLIRPQ9GZT3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLIRPQ9GZT3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
SLIRPQ9GZT3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.29■□□□□ 0.68
SLIRPQ9GZT3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLIRPQ9GZT3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLIRPQ9GZT3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.29■□□□□ 0.68
SLIRPQ9GZT3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLIRPQ9GZT3 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.27■□□□□ 0.68
SLIRPQ9GZT3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLIRPQ9GZT3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLIRPQ9GZT3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLIRPQ9GZT3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLIRPQ9GZT3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLIRPQ9GZT3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SLIRPQ9GZT3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLIRPQ9GZT3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLIRPQ9GZT3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.27■□□□□ 0.67
SLIRPQ9GZT3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLIRPQ9GZT3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLIRPQ9GZT3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
SLIRPQ9GZT3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLIRPQ9GZT3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLIRPQ9GZT3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SLIRPQ9GZT3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLIRPQ9GZT3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLIRPQ9GZT3 AC060814.1-201ENST00000554326 538 ntBASIC19.26■□□□□ 0.67
SLIRPQ9GZT3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLIRPQ9GZT3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms