Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ZNRF2P3-201ENST00000424200 374 ntBASIC19.18■□□□□ 0.66
VRK1Q99986 AC006455.2-201ENST00000429931 906 ntBASIC19.18■□□□□ 0.66
VRK1Q99986 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.18■□□□□ 0.66
VRK1Q99986 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VRK1Q99986 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
VRK1Q99986 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.18■□□□□ 0.66
VRK1Q99986 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK1Q99986 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
VRK1Q99986 AC137767.1-201ENST00000602918 1920 ntBASIC19.17■□□□□ 0.66
VRK1Q99986 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK1Q99986 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VRK1Q99986 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
VRK1Q99986 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VRK1Q99986 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
VRK1Q99986 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK1Q99986 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.17■□□□□ 0.66
VRK1Q99986 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.17■□□□□ 0.66
VRK1Q99986 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.17■□□□□ 0.66
VRK1Q99986 AL138724.1-201ENST00000606771 1088 ntBASIC19.17■□□□□ 0.66
VRK1Q99986 AC011298.3-201ENST00000615796 283 ntBASIC19.17■□□□□ 0.66
VRK1Q99986 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK1Q99986 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK1Q99986 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK1Q99986 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.17■□□□□ 0.66
VRK1Q99986 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.17■□□□□ 0.66
VRK1Q99986 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VRK1Q99986 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK1Q99986 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
VRK1Q99986 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK1Q99986 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VRK1Q99986 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VRK1Q99986 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VRK1Q99986 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.16■□□□□ 0.66
VRK1Q99986 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.16■□□□□ 0.66
VRK1Q99986 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.16■□□□□ 0.66
VRK1Q99986 AL136967.2-201ENST00000623968 743 ntBASIC19.16■□□□□ 0.66
VRK1Q99986 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
VRK1Q99986 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.16■□□□□ 0.66
VRK1Q99986 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK1Q99986 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.16■□□□□ 0.66
VRK1Q99986 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK1Q99986 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.16■□□□□ 0.66
VRK1Q99986 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VRK1Q99986 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
VRK1Q99986 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VRK1Q99986 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.15■□□□□ 0.66
VRK1Q99986 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VRK1Q99986 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VRK1Q99986 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VRK1Q99986 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
VRK1Q99986 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VRK1Q99986 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VRK1Q99986 AC105265.2-201ENST00000467189 838 ntBASIC19.15■□□□□ 0.66
VRK1Q99986 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.15■□□□□ 0.66
VRK1Q99986 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.15■□□□□ 0.66
VRK1Q99986 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.15■□□□□ 0.66
VRK1Q99986 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.15■□□□□ 0.66
VRK1Q99986 AP001330.3-201ENST00000520123 633 ntBASIC19.15■□□□□ 0.66
VRK1Q99986 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
VRK1Q99986 AC008764.7-201ENST00000593779 1081 ntBASIC19.15■□□□□ 0.66
VRK1Q99986 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.15■□□□□ 0.66
VRK1Q99986 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.15■□□□□ 0.66
VRK1Q99986 LINC00526-201ENST00000581067 1875 ntBASIC19.15■□□□□ 0.66
VRK1Q99986 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VRK1Q99986 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
VRK1Q99986 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VRK1Q99986 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
VRK1Q99986 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VRK1Q99986 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VRK1Q99986 MIR939-201ENST00000401314 82 ntBASIC19.14■□□□□ 0.65
VRK1Q99986 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.14■□□□□ 0.65
VRK1Q99986 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VRK1Q99986 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
VRK1Q99986 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VRK1Q99986 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VRK1Q99986 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
VRK1Q99986 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
VRK1Q99986 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VRK1Q99986 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
VRK1Q99986 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VRK1Q99986 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VRK1Q99986 AC091305.1-201ENST00000479476 895 ntBASIC19.13■□□□□ 0.65
VRK1Q99986 MIR3181-201ENST00000578512 73 ntBASIC19.13■□□□□ 0.65
VRK1Q99986 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VRK1Q99986 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VRK1Q99986 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
VRK1Q99986 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
VRK1Q99986 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VRK1Q99986 AC007375.3-201ENST00000600936 2314 ntBASIC19.13■□□□□ 0.65
VRK1Q99986 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VRK1Q99986 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VRK1Q99986 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VRK1Q99986 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VRK1Q99986 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VRK1Q99986 AC127496.7-201ENST00000625110 1798 ntBASIC19.12■□□□□ 0.65
VRK1Q99986 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
VRK1Q99986 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VRK1Q99986 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VRK1Q99986 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.12■□□□□ 0.65
VRK1Q99986 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms