Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
CFAP53Q96M91 RARA-203ENST00000394086 2008 ntTSL 2 BASIC29.35■■■□□ 2.29
CFAP53Q96M91 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CFAP53Q96M91 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
CFAP53Q96M91 LHPP-203ENST00000392757 840 ntTSL 3 BASIC29.34■■■□□ 2.29
CFAP53Q96M91 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC29.34■■■□□ 2.29
CFAP53Q96M91 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC29.34■■■□□ 2.29
CFAP53Q96M91 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CFAP53Q96M91 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CFAP53Q96M91 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CFAP53Q96M91 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
CFAP53Q96M91 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC29.33■■■□□ 2.29
CFAP53Q96M91 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CFAP53Q96M91 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC29.33■■■□□ 2.29
CFAP53Q96M91 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CFAP53Q96M91 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CFAP53Q96M91 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CFAP53Q96M91 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC29.33■■■□□ 2.29
CFAP53Q96M91 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CFAP53Q96M91 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC29.32■■■□□ 2.28
CFAP53Q96M91 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC29.32■■■□□ 2.28
CFAP53Q96M91 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CFAP53Q96M91 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CFAP53Q96M91 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CFAP53Q96M91 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CFAP53Q96M91 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC29.32■■■□□ 2.28
CFAP53Q96M91 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CFAP53Q96M91 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
CFAP53Q96M91 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC29.31■■■□□ 2.28
CFAP53Q96M91 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC29.31■■■□□ 2.28
CFAP53Q96M91 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CFAP53Q96M91 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC29.31■■■□□ 2.28
CFAP53Q96M91 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC29.31■■■□□ 2.28
CFAP53Q96M91 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC29.31■■■□□ 2.28
CFAP53Q96M91 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CFAP53Q96M91 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CFAP53Q96M91 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
CFAP53Q96M91 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC29.3■■■□□ 2.28
CFAP53Q96M91 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC29.3■■■□□ 2.28
CFAP53Q96M91 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.3■■■□□ 2.28
CFAP53Q96M91 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC29.3■■■□□ 2.28
CFAP53Q96M91 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC29.3■■■□□ 2.28
CFAP53Q96M91 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CFAP53Q96M91 OXCT2P1-201ENST00000447263 1535 ntBASIC29.3■■■□□ 2.28
CFAP53Q96M91 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC29.3■■■□□ 2.28
CFAP53Q96M91 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFAP53Q96M91 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
CFAP53Q96M91 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
CFAP53Q96M91 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFAP53Q96M91 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFAP53Q96M91 MIR935-201ENST00000401179 91 ntBASIC29.29■■■□□ 2.28
CFAP53Q96M91 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CFAP53Q96M91 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CFAP53Q96M91 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC29.29■■■□□ 2.28
CFAP53Q96M91 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFAP53Q96M91 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFAP53Q96M91 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFAP53Q96M91 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFAP53Q96M91 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC29.29■■■□□ 2.28
CFAP53Q96M91 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC29.29■■■□□ 2.28
CFAP53Q96M91 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CFAP53Q96M91 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC29.28■■■□□ 2.28
CFAP53Q96M91 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC29.28■■■□□ 2.28
CFAP53Q96M91 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
CFAP53Q96M91 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
CFAP53Q96M91 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CFAP53Q96M91 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CFAP53Q96M91 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
CFAP53Q96M91 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC29.28■■■□□ 2.28
CFAP53Q96M91 NME4-202ENST00000382940 766 ntTSL 3 BASIC29.28■■■□□ 2.28
CFAP53Q96M91 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
CFAP53Q96M91 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC29.28■■■□□ 2.28
CFAP53Q96M91 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC29.28■■■□□ 2.28
CFAP53Q96M91 NME4-211ENST00000620944 1193 ntTSL 2 BASIC29.28■■■□□ 2.28
CFAP53Q96M91 AL358852.1-201ENST00000623174 1268 ntBASIC29.28■■■□□ 2.28
CFAP53Q96M91 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC29.28■■■□□ 2.28
CFAP53Q96M91 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CFAP53Q96M91 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CFAP53Q96M91 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CFAP53Q96M91 JTB-203ENST00000368589 1216 ntTSL 2 BASIC29.27■■■□□ 2.28
CFAP53Q96M91 AC012414.1-201ENST00000556676 535 ntBASIC29.27■■■□□ 2.28
CFAP53Q96M91 AC105233.4-201ENST00000642045 216 ntBASIC29.27■■■□□ 2.28
CFAP53Q96M91 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CFAP53Q96M91 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CFAP53Q96M91 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC29.27■■■□□ 2.28
CFAP53Q96M91 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC29.27■■■□□ 2.28
CFAP53Q96M91 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CFAP53Q96M91 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
CFAP53Q96M91 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC29.26■■■□□ 2.28
CFAP53Q96M91 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CFAP53Q96M91 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.26■■■□□ 2.27
CFAP53Q96M91 AL354811.1-201ENST00000610286 706 ntBASIC29.26■■■□□ 2.27
CFAP53Q96M91 COMT-203ENST00000403184 2217 ntTSL 2 BASIC29.26■■■□□ 2.27
CFAP53Q96M91 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CFAP53Q96M91 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CFAP53Q96M91 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
CFAP53Q96M91 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
CFAP53Q96M91 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
CFAP53Q96M91 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CFAP53Q96M91 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms