Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF31Q96EP0 YBX1P1-201ENST00000445822 960 ntBASIC21.05■□□□□ 0.96
RNF31Q96EP0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF31Q96EP0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.05■□□□□ 0.96
RNF31Q96EP0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF31Q96EP0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF31Q96EP0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF31Q96EP0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF31Q96EP0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.05■□□□□ 0.96
RNF31Q96EP0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF31Q96EP0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF31Q96EP0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF31Q96EP0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF31Q96EP0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF31Q96EP0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF31Q96EP0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF31Q96EP0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF31Q96EP0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RNF31Q96EP0 AC034268.1-201ENST00000441047 882 ntBASIC21.04■□□□□ 0.96
RNF31Q96EP0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF31Q96EP0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF31Q96EP0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF31Q96EP0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF31Q96EP0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF31Q96EP0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF31Q96EP0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF31Q96EP0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF31Q96EP0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF31Q96EP0 AL353803.4-201ENST00000565882 1934 ntBASIC21.04■□□□□ 0.96
RNF31Q96EP0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF31Q96EP0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RNF31Q96EP0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF31Q96EP0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF31Q96EP0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF31Q96EP0 MIR572-201ENST00000384983 95 ntBASIC21.03■□□□□ 0.96
RNF31Q96EP0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF31Q96EP0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF31Q96EP0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF31Q96EP0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF31Q96EP0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RNF31Q96EP0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF31Q96EP0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF31Q96EP0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
RNF31Q96EP0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF31Q96EP0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF31Q96EP0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF31Q96EP0 AC022517.1-201ENST00000592429 346 ntBASIC21.02■□□□□ 0.96
RNF31Q96EP0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF31Q96EP0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF31Q96EP0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF31Q96EP0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF31Q96EP0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF31Q96EP0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RNF31Q96EP0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF31Q96EP0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF31Q96EP0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF31Q96EP0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF31Q96EP0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF31Q96EP0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RNF31Q96EP0 FP325331.1-202ENST00000623531 1380 ntBASIC21.01■□□□□ 0.95
RNF31Q96EP0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF31Q96EP0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RNF31Q96EP0 OR2I1P-207ENST00000453522 948 ntBASIC21.01■□□□□ 0.95
RNF31Q96EP0 CCDC92B-201ENST00000575506 885 ntBASIC21.01■□□□□ 0.95
RNF31Q96EP0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF31Q96EP0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF31Q96EP0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF31Q96EP0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF31Q96EP0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF31Q96EP0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF31Q96EP0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF31Q96EP0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF31Q96EP0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF31Q96EP0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21■□□□□ 0.95
RNF31Q96EP0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21■□□□□ 0.95
RNF31Q96EP0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF31Q96EP0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21■□□□□ 0.95
RNF31Q96EP0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF31Q96EP0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF31Q96EP0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21■□□□□ 0.95
RNF31Q96EP0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21■□□□□ 0.95
RNF31Q96EP0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF31Q96EP0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF31Q96EP0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF31Q96EP0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF31Q96EP0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RNF31Q96EP0 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.99■□□□□ 0.95
RNF31Q96EP0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF31Q96EP0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF31Q96EP0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
RNF31Q96EP0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF31Q96EP0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF31Q96EP0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF31Q96EP0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF31Q96EP0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF31Q96EP0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF31Q96EP0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
RNF31Q96EP0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF31Q96EP0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF31Q96EP0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms