Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2FQ969M7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
UBE2FQ969M7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
UBE2FQ969M7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2FQ969M7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.94■□□□□ 0.78
UBE2FQ969M7 AC019171.1-201ENST00000601251 1056 ntBASIC19.94■□□□□ 0.78
UBE2FQ969M7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.94■□□□□ 0.78
UBE2FQ969M7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2FQ969M7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2FQ969M7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2FQ969M7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
UBE2FQ969M7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2FQ969M7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.93■□□□□ 0.78
UBE2FQ969M7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.93■□□□□ 0.78
UBE2FQ969M7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2FQ969M7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2FQ969M7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2FQ969M7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UBE2FQ969M7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2FQ969M7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2FQ969M7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2FQ969M7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UBE2FQ969M7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2FQ969M7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2FQ969M7 AL033527.3-201ENST00000566366 1196 ntBASIC19.93■□□□□ 0.78
UBE2FQ969M7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2FQ969M7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2FQ969M7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2FQ969M7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2FQ969M7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2FQ969M7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2FQ969M7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.92■□□□□ 0.78
UBE2FQ969M7 AF106564.1-201ENST00000607058 2553 ntBASIC19.92■□□□□ 0.78
UBE2FQ969M7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2FQ969M7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
UBE2FQ969M7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
UBE2FQ969M7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
UBE2FQ969M7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2FQ969M7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2FQ969M7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2FQ969M7 AL157384.1-201ENST00000445995 2473 ntBASIC19.92■□□□□ 0.78
UBE2FQ969M7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2FQ969M7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2FQ969M7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
UBE2FQ969M7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
UBE2FQ969M7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2FQ969M7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2FQ969M7 KRT18P60-201ENST00000312876 1297 ntBASIC19.91■□□□□ 0.78
UBE2FQ969M7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2FQ969M7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.91■□□□□ 0.78
UBE2FQ969M7 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.91■□□□□ 0.78
UBE2FQ969M7 MIR4281-201ENST00000580852 62 ntBASIC19.91■□□□□ 0.78
UBE2FQ969M7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
UBE2FQ969M7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2FQ969M7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
UBE2FQ969M7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2FQ969M7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2FQ969M7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE2FQ969M7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2FQ969M7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2FQ969M7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.9■□□□□ 0.78
UBE2FQ969M7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE2FQ969M7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2FQ969M7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
UBE2FQ969M7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
UBE2FQ969M7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.9■□□□□ 0.78
UBE2FQ969M7 LINC01960-201ENST00000563759 1884 ntBASIC19.9■□□□□ 0.78
UBE2FQ969M7 AC244015.2-201ENST00000616358 1861 ntBASIC19.9■□□□□ 0.78
UBE2FQ969M7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2FQ969M7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2FQ969M7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
UBE2FQ969M7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
UBE2FQ969M7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
UBE2FQ969M7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2FQ969M7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2FQ969M7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
UBE2FQ969M7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2FQ969M7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UBE2FQ969M7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2FQ969M7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2FQ969M7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.89■□□□□ 0.77
UBE2FQ969M7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2FQ969M7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
UBE2FQ969M7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UBE2FQ969M7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2FQ969M7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2FQ969M7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.88■□□□□ 0.77
UBE2FQ969M7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2FQ969M7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2FQ969M7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2FQ969M7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2FQ969M7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
UBE2FQ969M7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2FQ969M7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2FQ969M7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2FQ969M7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2FQ969M7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2FQ969M7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UBE2FQ969M7 DUX4L18-201ENST00000553347 1267 ntBASIC19.88■□□□□ 0.77
UBE2FQ969M7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms