Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRUNE2Q8WUY3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.26■■□□□ 1.31
PRUNE2Q8WUY3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.26■■□□□ 1.31
PRUNE2Q8WUY3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.26■■□□□ 1.31
PRUNE2Q8WUY3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PRUNE2Q8WUY3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PRUNE2Q8WUY3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
PRUNE2Q8WUY3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRUNE2Q8WUY3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PRUNE2Q8WUY3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.25■■□□□ 1.31
PRUNE2Q8WUY3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.25■■□□□ 1.31
PRUNE2Q8WUY3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.25■■□□□ 1.31
PRUNE2Q8WUY3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRUNE2Q8WUY3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.25■■□□□ 1.31
PRUNE2Q8WUY3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.25■■□□□ 1.31
PRUNE2Q8WUY3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.25■■□□□ 1.31
PRUNE2Q8WUY3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRUNE2Q8WUY3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
PRUNE2Q8WUY3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.24■■□□□ 1.31
PRUNE2Q8WUY3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.24■■□□□ 1.31
PRUNE2Q8WUY3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRUNE2Q8WUY3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRUNE2Q8WUY3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.24■■□□□ 1.31
PRUNE2Q8WUY3 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.24■■□□□ 1.31
PRUNE2Q8WUY3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRUNE2Q8WUY3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.24■■□□□ 1.31
PRUNE2Q8WUY3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.24■■□□□ 1.31
PRUNE2Q8WUY3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.24■■□□□ 1.31
PRUNE2Q8WUY3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.23■■□□□ 1.31
PRUNE2Q8WUY3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.23■■□□□ 1.31
PRUNE2Q8WUY3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.23■■□□□ 1.31
PRUNE2Q8WUY3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PRUNE2Q8WUY3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.23■■□□□ 1.31
PRUNE2Q8WUY3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 MKRN4P-201ENST00000444706 1521 ntBASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 KRT87P-202ENST00000534226 1464 ntBASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 ESRRAP1-201ENST00000400596 1257 ntBASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 MIR4758-201ENST00000577688 71 ntBASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.22■■□□□ 1.31
PRUNE2Q8WUY3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.21■■□□□ 1.31
PRUNE2Q8WUY3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
PRUNE2Q8WUY3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.21■■□□□ 1.31
PRUNE2Q8WUY3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PRUNE2Q8WUY3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PRUNE2Q8WUY3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRUNE2Q8WUY3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC23.21■■□□□ 1.31
PRUNE2Q8WUY3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
PRUNE2Q8WUY3 AC142381.4-202ENST00000563973 229 ntBASIC23.21■■□□□ 1.31
PRUNE2Q8WUY3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRUNE2Q8WUY3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.31
PRUNE2Q8WUY3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.2■■□□□ 1.31
PRUNE2Q8WUY3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRUNE2Q8WUY3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PRUNE2Q8WUY3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PRUNE2Q8WUY3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
PRUNE2Q8WUY3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRUNE2Q8WUY3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRUNE2Q8WUY3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.19■■□□□ 1.3
PRUNE2Q8WUY3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
PRUNE2Q8WUY3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.19■■□□□ 1.3
PRUNE2Q8WUY3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PRUNE2Q8WUY3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRUNE2Q8WUY3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRUNE2Q8WUY3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PRUNE2Q8WUY3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.19■■□□□ 1.3
PRUNE2Q8WUY3 LINC01023-201ENST00000606054 436 ntBASIC23.19■■□□□ 1.3
PRUNE2Q8WUY3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRUNE2Q8WUY3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRUNE2Q8WUY3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.19■■□□□ 1.3
PRUNE2Q8WUY3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRUNE2Q8WUY3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.18■■□□□ 1.3
PRUNE2Q8WUY3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRUNE2Q8WUY3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRUNE2Q8WUY3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRUNE2Q8WUY3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PRUNE2Q8WUY3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PRUNE2Q8WUY3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PRUNE2Q8WUY3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PRUNE2Q8WUY3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRUNE2Q8WUY3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms