Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SVIPQ8NHG7 AC073508.3-201ENST00000619697 1419 ntBASIC13.9□□□□□ -0.19
SVIPQ8NHG7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 DUSP8P5-201ENST00000422884 1815 ntBASIC13.89□□□□□ -0.19
SVIPQ8NHG7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SVIPQ8NHG7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SVIPQ8NHG7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SVIPQ8NHG7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SVIPQ8NHG7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 AC007614.4-201ENST00000564048 1827 ntBASIC13.85□□□□□ -0.19
SVIPQ8NHG7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SVIPQ8NHG7 PRORSD1P-202ENST00000563365 2154 ntBASIC13.85□□□□□ -0.19
SVIPQ8NHG7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SVIPQ8NHG7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms