Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ECEL1P3-201ENST00000427961 737 ntBASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 AC079140.4-201ENST00000507448 529 ntBASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 AC006058.3-201ENST00000606217 1069 ntBASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC168Q8NDH2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC168Q8NDH2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC168Q8NDH2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC168Q8NDH2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC168Q8NDH2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC168Q8NDH2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC168Q8NDH2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC168Q8NDH2 FP325331.1-202ENST00000623531 1380 ntBASIC18.53■□□□□ 0.56
CCDC168Q8NDH2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC168Q8NDH2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC168Q8NDH2 AC142381.4-202ENST00000563973 229 ntBASIC18.52■□□□□ 0.56
CCDC168Q8NDH2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC168Q8NDH2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC168Q8NDH2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC168Q8NDH2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC168Q8NDH2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC168Q8NDH2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC168Q8NDH2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 AL161729.1-201ENST00000604104 1402 ntBASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC168Q8NDH2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 FAM210CP-201ENST00000445714 574 ntBASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 AC128676.1-201ENST00000454392 318 ntBASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC168Q8NDH2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 UNC93B4-201ENST00000505679 747 ntBASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 RARRES2P4-201ENST00000514074 484 ntBASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 MKRN4P-201ENST00000444706 1521 ntBASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC168Q8NDH2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 LINC01529-204ENST00000636474 1715 ntBASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 AC211429.1-201ENST00000415277 523 ntBASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC168Q8NDH2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms