Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD1Q8N668 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.06■□□□□ 0.48
COMMD1Q8N668 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD1Q8N668 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.06■□□□□ 0.48
COMMD1Q8N668 AC004448.1-201ENST00000458332 883 ntBASIC18.06■□□□□ 0.48
COMMD1Q8N668 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.06■□□□□ 0.48
COMMD1Q8N668 AL356740.2-201ENST00000601559 647 ntBASIC18.06■□□□□ 0.48
COMMD1Q8N668 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.06■□□□□ 0.48
COMMD1Q8N668 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD1Q8N668 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COMMD1Q8N668 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD1Q8N668 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD1Q8N668 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD1Q8N668 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COMMD1Q8N668 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD1Q8N668 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD1Q8N668 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD1Q8N668 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD1Q8N668 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD1Q8N668 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
COMMD1Q8N668 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.05■□□□□ 0.48
COMMD1Q8N668 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
COMMD1Q8N668 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.05■□□□□ 0.48
COMMD1Q8N668 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD1Q8N668 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD1Q8N668 AL161729.1-201ENST00000604104 1402 ntBASIC18.05■□□□□ 0.48
COMMD1Q8N668 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD1Q8N668 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COMMD1Q8N668 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.05■□□□□ 0.48
COMMD1Q8N668 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COMMD1Q8N668 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.04■□□□□ 0.48
COMMD1Q8N668 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD1Q8N668 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD1Q8N668 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.04■□□□□ 0.48
COMMD1Q8N668 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
COMMD1Q8N668 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.04■□□□□ 0.48
COMMD1Q8N668 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.04■□□□□ 0.48
COMMD1Q8N668 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.04■□□□□ 0.48
COMMD1Q8N668 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.04■□□□□ 0.48
COMMD1Q8N668 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD1Q8N668 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.04■□□□□ 0.48
COMMD1Q8N668 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
COMMD1Q8N668 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD1Q8N668 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD1Q8N668 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
COMMD1Q8N668 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COMMD1Q8N668 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COMMD1Q8N668 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COMMD1Q8N668 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD1Q8N668 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD1Q8N668 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD1Q8N668 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
COMMD1Q8N668 AC092053.2-201ENST00000640557 1818 ntBASIC18.03■□□□□ 0.48
COMMD1Q8N668 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.03■□□□□ 0.48
COMMD1Q8N668 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.03■□□□□ 0.48
COMMD1Q8N668 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD1Q8N668 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.03■□□□□ 0.48
COMMD1Q8N668 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD1Q8N668 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD1Q8N668 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COMMD1Q8N668 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.03■□□□□ 0.48
COMMD1Q8N668 AC008406.3-201ENST00000620001 1374 ntBASIC18.03■□□□□ 0.48
COMMD1Q8N668 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
COMMD1Q8N668 AL022069.1-201ENST00000568025 1636 ntBASIC18.02■□□□□ 0.48
COMMD1Q8N668 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD1Q8N668 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
COMMD1Q8N668 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD1Q8N668 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.02■□□□□ 0.48
COMMD1Q8N668 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.02■□□□□ 0.48
COMMD1Q8N668 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.02■□□□□ 0.48
COMMD1Q8N668 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.02■□□□□ 0.48
COMMD1Q8N668 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
COMMD1Q8N668 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.02■□□□□ 0.48
COMMD1Q8N668 MIR3621-201ENST00000580529 85 ntBASIC18.02■□□□□ 0.48
COMMD1Q8N668 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.02■□□□□ 0.47
COMMD1Q8N668 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COMMD1Q8N668 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
COMMD1Q8N668 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COMMD1Q8N668 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
COMMD1Q8N668 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
COMMD1Q8N668 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD1Q8N668 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
COMMD1Q8N668 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD1Q8N668 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
COMMD1Q8N668 AL117332.1-201ENST00000622628 974 ntBASIC18.01■□□□□ 0.47
COMMD1Q8N668 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
COMMD1Q8N668 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.01■□□□□ 0.47
COMMD1Q8N668 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD1Q8N668 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD1Q8N668 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.01■□□□□ 0.47
COMMD1Q8N668 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD1Q8N668 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
COMMD1Q8N668 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COMMD1Q8N668 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD1Q8N668 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD1Q8N668 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD1Q8N668 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18■□□□□ 0.47
COMMD1Q8N668 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
COMMD1Q8N668 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18■□□□□ 0.47
COMMD1Q8N668 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms