Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 LINC00526-201ENST00000581067 1875 ntBASIC17.8■□□□□ 0.44
LINC00311Q8N616 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LINC00311Q8N616 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC00311Q8N616 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00311Q8N616 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
LINC00311Q8N616 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00311Q8N616 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC00311Q8N616 UNC93B3-201ENST00000308076 687 ntBASIC17.79■□□□□ 0.44
LINC00311Q8N616 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LINC00311Q8N616 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00311Q8N616 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00311Q8N616 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00311Q8N616 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC00311Q8N616 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00311Q8N616 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00311Q8N616 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00311Q8N616 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.79■□□□□ 0.44
LINC00311Q8N616 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00311Q8N616 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00311Q8N616 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
LINC00311Q8N616 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00311Q8N616 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00311Q8N616 AC139530.1-201ENST00000575312 1977 ntBASIC17.79■□□□□ 0.44
LINC00311Q8N616 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.79■□□□□ 0.44
LINC00311Q8N616 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LINC00311Q8N616 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00311Q8N616 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00311Q8N616 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC00311Q8N616 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00311Q8N616 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.78■□□□□ 0.44
LINC00311Q8N616 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00311Q8N616 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LINC00311Q8N616 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC00311Q8N616 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00311Q8N616 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC00311Q8N616 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00311Q8N616 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.78■□□□□ 0.44
LINC00311Q8N616 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00311Q8N616 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.78■□□□□ 0.44
LINC00311Q8N616 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
LINC00311Q8N616 AC087239.1-201ENST00000622671 572 ntBASIC17.78■□□□□ 0.44
LINC00311Q8N616 AC080038.3-201ENST00000623346 1952 ntBASIC17.78■□□□□ 0.44
LINC00311Q8N616 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00311Q8N616 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.78■□□□□ 0.44
LINC00311Q8N616 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00311Q8N616 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00311Q8N616 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LINC00311Q8N616 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LINC00311Q8N616 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC00311Q8N616 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC00311Q8N616 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LINC00311Q8N616 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00311Q8N616 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC00311Q8N616 AP005435.1-201ENST00000529293 1178 ntBASIC17.77■□□□□ 0.44
LINC00311Q8N616 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00311Q8N616 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LINC00311Q8N616 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LINC00311Q8N616 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LINC00311Q8N616 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LINC00311Q8N616 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LINC00311Q8N616 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00311Q8N616 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00311Q8N616 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LINC00311Q8N616 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00311Q8N616 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LINC00311Q8N616 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00311Q8N616 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.76■□□□□ 0.43
LINC00311Q8N616 AC079089.2-201ENST00000531211 1277 ntBASIC17.76■□□□□ 0.43
LINC00311Q8N616 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.76■□□□□ 0.43
LINC00311Q8N616 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00311Q8N616 AC010525.1-201ENST00000585559 441 ntBASIC17.76■□□□□ 0.43
LINC00311Q8N616 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00311Q8N616 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00311Q8N616 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC00311Q8N616 AC092053.2-201ENST00000640557 1818 ntBASIC17.76■□□□□ 0.43
LINC00311Q8N616 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LINC00311Q8N616 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00311Q8N616 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LINC00311Q8N616 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00311Q8N616 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00311Q8N616 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC00311Q8N616 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
LINC00311Q8N616 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC00311Q8N616 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00311Q8N616 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC00311Q8N616 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00311Q8N616 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00311Q8N616 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC00311Q8N616 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00311Q8N616 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00311Q8N616 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00311Q8N616 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00311Q8N616 AC010141.3-201ENST00000456659 717 ntBASIC17.75■□□□□ 0.43
LINC00311Q8N616 AL136162.1-201ENST00000607711 1078 ntBASIC17.75■□□□□ 0.43
LINC00311Q8N616 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC00311Q8N616 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LINC00311Q8N616 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00311Q8N616 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LINC00311Q8N616 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00311Q8N616 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 1533.1 ms