Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC30.76■■■□□ 2.52
ARHGEF28Q8N1W1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ARHGEF28Q8N1W1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC30.76■■■□□ 2.51
ARHGEF28Q8N1W1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ARHGEF28Q8N1W1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ARHGEF28Q8N1W1 GXYLT1P2-201ENST00000433312 1230 ntBASIC30.76■■■□□ 2.51
ARHGEF28Q8N1W1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC30.76■■■□□ 2.51
ARHGEF28Q8N1W1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC30.76■■■□□ 2.51
ARHGEF28Q8N1W1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
ARHGEF28Q8N1W1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ARHGEF28Q8N1W1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC30.75■■■□□ 2.51
ARHGEF28Q8N1W1 DBI-210ENST00000542275 757 ntTSL 5 BASIC30.75■■■□□ 2.51
ARHGEF28Q8N1W1 DUSP8P3-201ENST00000399571 1760 ntBASIC30.75■■■□□ 2.51
ARHGEF28Q8N1W1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
ARHGEF28Q8N1W1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
ARHGEF28Q8N1W1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC30.74■■■□□ 2.51
ARHGEF28Q8N1W1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
ARHGEF28Q8N1W1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC30.74■■■□□ 2.51
ARHGEF28Q8N1W1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
ARHGEF28Q8N1W1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
ARHGEF28Q8N1W1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ARHGEF28Q8N1W1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ARHGEF28Q8N1W1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC30.73■■■□□ 2.51
ARHGEF28Q8N1W1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
ARHGEF28Q8N1W1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
ARHGEF28Q8N1W1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC30.73■■■□□ 2.51
ARHGEF28Q8N1W1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ARHGEF28Q8N1W1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC30.73■■■□□ 2.51
ARHGEF28Q8N1W1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC30.73■■■□□ 2.51
ARHGEF28Q8N1W1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC30.72■■■□□ 2.51
ARHGEF28Q8N1W1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
ARHGEF28Q8N1W1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ARHGEF28Q8N1W1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC30.72■■■□□ 2.51
ARHGEF28Q8N1W1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ARHGEF28Q8N1W1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
ARHGEF28Q8N1W1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
ARHGEF28Q8N1W1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
ARHGEF28Q8N1W1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC30.72■■■□□ 2.51
ARHGEF28Q8N1W1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 AC016769.1-201ENST00000409132 1010 ntBASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ARHGEF28Q8N1W1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ARHGEF28Q8N1W1 AC137761.2-201ENST00000561729 223 ntBASIC30.7■■■□□ 2.51
ARHGEF28Q8N1W1 AC145350.3-201ENST00000569033 163 ntBASIC30.7■■■□□ 2.51
ARHGEF28Q8N1W1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.5
ARHGEF28Q8N1W1 ANOS2P-203ENST00000472227 1816 ntBASIC30.7■■■□□ 2.5
ARHGEF28Q8N1W1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
ARHGEF28Q8N1W1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
ARHGEF28Q8N1W1 COX20-201ENST00000366528 568 ntTSL 2 BASIC30.7■■■□□ 2.5
ARHGEF28Q8N1W1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC30.7■■■□□ 2.5
ARHGEF28Q8N1W1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC30.7■■■□□ 2.5
ARHGEF28Q8N1W1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC30.7■■■□□ 2.5
ARHGEF28Q8N1W1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC30.7■■■□□ 2.5
ARHGEF28Q8N1W1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
ARHGEF28Q8N1W1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
ARHGEF28Q8N1W1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC30.69■■■□□ 2.5
ARHGEF28Q8N1W1 AC073111.5-205ENST00000641717 521 ntBASIC30.69■■■□□ 2.5
ARHGEF28Q8N1W1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ARHGEF28Q8N1W1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC30.68■■■□□ 2.5
ARHGEF28Q8N1W1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC30.68■■■□□ 2.5
ARHGEF28Q8N1W1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC30.68■■■□□ 2.5
ARHGEF28Q8N1W1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ARHGEF28Q8N1W1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ARHGEF28Q8N1W1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC30.68■■■□□ 2.5
ARHGEF28Q8N1W1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC30.68■■■□□ 2.5
ARHGEF28Q8N1W1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ARHGEF28Q8N1W1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
ARHGEF28Q8N1W1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ARHGEF28Q8N1W1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
ARHGEF28Q8N1W1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC30.67■■■□□ 2.5
ARHGEF28Q8N1W1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ARHGEF28Q8N1W1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC30.67■■■□□ 2.5
ARHGEF28Q8N1W1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ARHGEF28Q8N1W1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ARHGEF28Q8N1W1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ARHGEF28Q8N1W1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC30.67■■■□□ 2.5
ARHGEF28Q8N1W1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC30.67■■■□□ 2.5
ARHGEF28Q8N1W1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
ARHGEF28Q8N1W1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ARHGEF28Q8N1W1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC30.66■■■□□ 2.5
ARHGEF28Q8N1W1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ARHGEF28Q8N1W1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
ARHGEF28Q8N1W1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC30.65■■■□□ 2.5
ARHGEF28Q8N1W1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ARHGEF28Q8N1W1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ARHGEF28Q8N1W1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC30.65■■■□□ 2.5
ARHGEF28Q8N1W1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC30.65■■■□□ 2.5
ARHGEF28Q8N1W1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ARHGEF28Q8N1W1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC30.64■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms