Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 AC010141.3-201ENST00000456659 717 ntBASIC27.36■■□□□ 1.97
DDX60Q8IY21 GALNS-213ENST00000569433 723 ntTSL 3 BASIC27.36■■□□□ 1.97
DDX60Q8IY21 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.36■■□□□ 1.97
DDX60Q8IY21 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
DDX60Q8IY21 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
DDX60Q8IY21 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC27.36■■□□□ 1.97
DDX60Q8IY21 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
DDX60Q8IY21 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
DDX60Q8IY21 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC27.36■■□□□ 1.97
DDX60Q8IY21 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
DDX60Q8IY21 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC27.35■■□□□ 1.97
DDX60Q8IY21 DBI-210ENST00000542275 757 ntTSL 5 BASIC27.35■■□□□ 1.97
DDX60Q8IY21 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC27.35■■□□□ 1.97
DDX60Q8IY21 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
DDX60Q8IY21 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
DDX60Q8IY21 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
DDX60Q8IY21 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
DDX60Q8IY21 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
DDX60Q8IY21 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
DDX60Q8IY21 AC137761.2-201ENST00000561729 223 ntBASIC27.34■■□□□ 1.97
DDX60Q8IY21 AC145350.3-201ENST00000569033 163 ntBASIC27.34■■□□□ 1.97
DDX60Q8IY21 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC27.34■■□□□ 1.97
DDX60Q8IY21 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
DDX60Q8IY21 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
DDX60Q8IY21 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
DDX60Q8IY21 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC27.33■■□□□ 1.97
DDX60Q8IY21 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.33■■□□□ 1.97
DDX60Q8IY21 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC27.33■■□□□ 1.97
DDX60Q8IY21 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
DDX60Q8IY21 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
DDX60Q8IY21 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
DDX60Q8IY21 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
DDX60Q8IY21 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
DDX60Q8IY21 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
DDX60Q8IY21 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.32■■□□□ 1.96
DDX60Q8IY21 AC092068.2-201ENST00000590491 1708 ntBASIC27.32■■□□□ 1.96
DDX60Q8IY21 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.32■■□□□ 1.96
DDX60Q8IY21 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
DDX60Q8IY21 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC27.32■■□□□ 1.96
DDX60Q8IY21 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
DDX60Q8IY21 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
DDX60Q8IY21 DENND3-207ENST00000518347 850 ntTSL 2 BASIC27.32■■□□□ 1.96
DDX60Q8IY21 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC27.32■■□□□ 1.96
DDX60Q8IY21 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC27.32■■□□□ 1.96
DDX60Q8IY21 WWOX-218ENST00000627394 894 ntTSL 5 BASIC27.32■■□□□ 1.96
DDX60Q8IY21 AC073111.5-205ENST00000641717 521 ntBASIC27.32■■□□□ 1.96
DDX60Q8IY21 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC27.32■■□□□ 1.96
DDX60Q8IY21 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
DDX60Q8IY21 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
DDX60Q8IY21 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
DDX60Q8IY21 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC27.31■■□□□ 1.96
DDX60Q8IY21 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.31■■□□□ 1.96
DDX60Q8IY21 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
DDX60Q8IY21 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC27.31■■□□□ 1.96
DDX60Q8IY21 COX20-201ENST00000366528 568 ntTSL 2 BASIC27.31■■□□□ 1.96
DDX60Q8IY21 ID1-201ENST00000376105 1233 ntBASIC27.31■■□□□ 1.96
DDX60Q8IY21 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.31■■□□□ 1.96
DDX60Q8IY21 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
DDX60Q8IY21 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
DDX60Q8IY21 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC27.31■■□□□ 1.96
DDX60Q8IY21 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC27.31■■□□□ 1.96
DDX60Q8IY21 STX7-201ENST00000367937 1090 ntTSL 5 BASIC27.3■■□□□ 1.96
DDX60Q8IY21 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
DDX60Q8IY21 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC27.3■■□□□ 1.96
DDX60Q8IY21 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
DDX60Q8IY21 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
DDX60Q8IY21 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
DDX60Q8IY21 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
DDX60Q8IY21 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
DDX60Q8IY21 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC27.3■■□□□ 1.96
DDX60Q8IY21 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC27.3■■□□□ 1.96
DDX60Q8IY21 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
DDX60Q8IY21 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX60Q8IY21 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX60Q8IY21 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX60Q8IY21 DUSP8P3-201ENST00000399571 1760 ntBASIC27.29■■□□□ 1.96
DDX60Q8IY21 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
DDX60Q8IY21 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX60Q8IY21 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
DDX60Q8IY21 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC27.29■■□□□ 1.96
DDX60Q8IY21 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC27.29■■□□□ 1.96
DDX60Q8IY21 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC27.29■■□□□ 1.96
DDX60Q8IY21 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC27.29■■□□□ 1.96
DDX60Q8IY21 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
DDX60Q8IY21 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
DDX60Q8IY21 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
DDX60Q8IY21 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.28■■□□□ 1.96
DDX60Q8IY21 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.28■■□□□ 1.96
DDX60Q8IY21 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
DDX60Q8IY21 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
DDX60Q8IY21 HSCB-202ENST00000398941 955 ntTSL 2 BASIC27.28■■□□□ 1.96
DDX60Q8IY21 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC27.28■■□□□ 1.96
DDX60Q8IY21 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
DDX60Q8IY21 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
DDX60Q8IY21 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC27.28■■□□□ 1.96
DDX60Q8IY21 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
DDX60Q8IY21 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX60Q8IY21 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
DDX60Q8IY21 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC27.27■■□□□ 1.96
DDX60Q8IY21 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms