Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYSMD2Q8IV50 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.23■□□□□ 0.67
LYSMD2Q8IV50 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYSMD2Q8IV50 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD2Q8IV50 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD2Q8IV50 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD2Q8IV50 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LYSMD2Q8IV50 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.21■□□□□ 0.67
LYSMD2Q8IV50 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
LYSMD2Q8IV50 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYSMD2Q8IV50 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 RAP2CP1-202ENST00000605179 643 ntBASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.2■□□□□ 0.66
LYSMD2Q8IV50 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYSMD2Q8IV50 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 ABHD17AP4-201ENST00000411545 909 ntBASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 AC026202.3-201ENST00000600805 1127 ntBASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD2Q8IV50 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms