Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
DDX53Q86TM3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.41■■□□□ 1.34
DDX53Q86TM3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
DDX53Q86TM3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
DDX53Q86TM3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.41■■□□□ 1.34
DDX53Q86TM3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.41■■□□□ 1.34
DDX53Q86TM3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.41■■□□□ 1.34
DDX53Q86TM3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
DDX53Q86TM3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.41■■□□□ 1.34
DDX53Q86TM3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
DDX53Q86TM3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.4■■□□□ 1.34
DDX53Q86TM3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
DDX53Q86TM3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
DDX53Q86TM3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
DDX53Q86TM3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.4■■□□□ 1.34
DDX53Q86TM3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.4■■□□□ 1.34
DDX53Q86TM3 RAP2CP1-201ENST00000605103 478 ntBASIC23.4■■□□□ 1.34
DDX53Q86TM3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.4■■□□□ 1.34
DDX53Q86TM3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
DDX53Q86TM3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.4■■□□□ 1.34
DDX53Q86TM3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
DDX53Q86TM3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.39■■□□□ 1.34
DDX53Q86TM3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
DDX53Q86TM3 HLA-L-209ENST00000420110 1011 ntBASIC23.39■■□□□ 1.33
DDX53Q86TM3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.39■■□□□ 1.33
DDX53Q86TM3 CDCA4P2-201ENST00000441182 718 ntBASIC23.39■■□□□ 1.33
DDX53Q86TM3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.39■■□□□ 1.33
DDX53Q86TM3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.39■■□□□ 1.33
DDX53Q86TM3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.39■■□□□ 1.33
DDX53Q86TM3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.39■■□□□ 1.33
DDX53Q86TM3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
DDX53Q86TM3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX53Q86TM3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX53Q86TM3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
DDX53Q86TM3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.38■■□□□ 1.33
DDX53Q86TM3 AC073111.5-205ENST00000641717 521 ntBASIC23.38■■□□□ 1.33
DDX53Q86TM3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
DDX53Q86TM3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX53Q86TM3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.38■■□□□ 1.33
DDX53Q86TM3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.38■■□□□ 1.33
DDX53Q86TM3 OXCT2P1-201ENST00000447263 1535 ntBASIC23.38■■□□□ 1.33
DDX53Q86TM3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
DDX53Q86TM3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX53Q86TM3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX53Q86TM3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX53Q86TM3 KRT19P1-201ENST00000405746 1186 ntBASIC23.37■■□□□ 1.33
DDX53Q86TM3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
DDX53Q86TM3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
DDX53Q86TM3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.37■■□□□ 1.33
DDX53Q86TM3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX53Q86TM3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.37■■□□□ 1.33
DDX53Q86TM3 AL139125.2-201ENST00000623134 1869 ntBASIC23.36■■□□□ 1.33
DDX53Q86TM3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX53Q86TM3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX53Q86TM3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.36■■□□□ 1.33
DDX53Q86TM3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.36■■□□□ 1.33
DDX53Q86TM3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX53Q86TM3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX53Q86TM3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX53Q86TM3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX53Q86TM3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX53Q86TM3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX53Q86TM3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
DDX53Q86TM3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.35■■□□□ 1.33
DDX53Q86TM3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX53Q86TM3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX53Q86TM3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.35■■□□□ 1.33
DDX53Q86TM3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.35■■□□□ 1.33
DDX53Q86TM3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
DDX53Q86TM3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.35■■□□□ 1.33
DDX53Q86TM3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.35■■□□□ 1.33
DDX53Q86TM3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX53Q86TM3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.35■■□□□ 1.33
DDX53Q86TM3 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX53Q86TM3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
DDX53Q86TM3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX53Q86TM3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
DDX53Q86TM3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
DDX53Q86TM3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.34■■□□□ 1.33
DDX53Q86TM3 BID-214ENST00000617586 542 ntTSL 5 BASIC23.34■■□□□ 1.33
DDX53Q86TM3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX53Q86TM3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX53Q86TM3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX53Q86TM3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DDX53Q86TM3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX53Q86TM3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX53Q86TM3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DDX53Q86TM3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.33■■□□□ 1.33
DDX53Q86TM3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX53Q86TM3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX53Q86TM3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX53Q86TM3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.33■■□□□ 1.33
DDX53Q86TM3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.33■■□□□ 1.33
DDX53Q86TM3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.33■■□□□ 1.33
DDX53Q86TM3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.33■■□□□ 1.33
DDX53Q86TM3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
DDX53Q86TM3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
DDX53Q86TM3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
DDX53Q86TM3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.33■■□□□ 1.32
DDX53Q86TM3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms