Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00575Q6W349 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00575Q6W349 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00575Q6W349 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00575Q6W349 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00575Q6W349 MLEC-202ENST00000412616 841 ntTSL 3 BASIC13.87□□□□□ -0.19
LINC00575Q6W349 RPS2P7-201ENST00000447334 885 ntBASIC13.87□□□□□ -0.19
LINC00575Q6W349 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00575Q6W349 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00575Q6W349 LINC01521-201ENST00000504184 1943 ntBASIC13.87□□□□□ -0.19
LINC00575Q6W349 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00575Q6W349 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00575Q6W349 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00575Q6W349 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00575Q6W349 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00575Q6W349 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00575Q6W349 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
LINC00575Q6W349 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
LINC00575Q6W349 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
LINC00575Q6W349 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00575Q6W349 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
LINC00575Q6W349 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00575Q6W349 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00575Q6W349 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC13.86□□□□□ -0.19
LINC00575Q6W349 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00575Q6W349 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
LINC00575Q6W349 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00575Q6W349 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00575Q6W349 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00575Q6W349 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LINC00575Q6W349 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00575Q6W349 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00575Q6W349 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00575Q6W349 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00575Q6W349 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00575Q6W349 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00575Q6W349 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00575Q6W349 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
LINC00575Q6W349 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC00575Q6W349 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC00575Q6W349 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC00575Q6W349 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC00575Q6W349 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00575Q6W349 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
LINC00575Q6W349 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC00575Q6W349 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LINC00575Q6W349 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC00575Q6W349 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC00575Q6W349 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00575Q6W349 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC00575Q6W349 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00575Q6W349 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00575Q6W349 TPT1-202ENST00000379055 948 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00575Q6W349 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LINC00575Q6W349 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00575Q6W349 MACF1-219ENST00000484793 834 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00575Q6W349 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00575Q6W349 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00575Q6W349 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LINC00575Q6W349 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00575Q6W349 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00575Q6W349 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00575Q6W349 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00575Q6W349 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LINC00575Q6W349 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LINC00575Q6W349 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC00575Q6W349 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00575Q6W349 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00575Q6W349 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00575Q6W349 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00575Q6W349 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00575Q6W349 GOLGA2P6-201ENST00000340929 2049 ntBASIC13.82□□□□□ -0.2
LINC00575Q6W349 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00575Q6W349 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 HES4-204ENST00000484667 667 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms