Protein–RNA interactions for Protein: Q5TKA1

LIN9, Protein lin-9 homolog, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN9Q5TKA1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.7■■□□□ 1.38
LIN9Q5TKA1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.7■■□□□ 1.38
LIN9Q5TKA1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LIN9Q5TKA1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LIN9Q5TKA1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LIN9Q5TKA1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LIN9Q5TKA1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.69■■□□□ 1.38
LIN9Q5TKA1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.69■■□□□ 1.38
LIN9Q5TKA1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.69■■□□□ 1.38
LIN9Q5TKA1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.69■■□□□ 1.38
LIN9Q5TKA1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LIN9Q5TKA1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
LIN9Q5TKA1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LIN9Q5TKA1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.68■■□□□ 1.38
LIN9Q5TKA1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LIN9Q5TKA1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
LIN9Q5TKA1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
LIN9Q5TKA1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LIN9Q5TKA1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.68■■□□□ 1.38
LIN9Q5TKA1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.68■■□□□ 1.38
LIN9Q5TKA1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
LIN9Q5TKA1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.68■■□□□ 1.38
LIN9Q5TKA1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LIN9Q5TKA1 AL353803.4-201ENST00000565882 1934 ntBASIC23.67■■□□□ 1.38
LIN9Q5TKA1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.67■■□□□ 1.38
LIN9Q5TKA1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.67■■□□□ 1.38
LIN9Q5TKA1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.67■■□□□ 1.38
LIN9Q5TKA1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LIN9Q5TKA1 AC133637.1-201ENST00000624115 1537 ntBASIC23.67■■□□□ 1.38
LIN9Q5TKA1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LIN9Q5TKA1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LIN9Q5TKA1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LIN9Q5TKA1 AC144652.1-201ENST00000609974 1624 ntBASIC23.66■■□□□ 1.38
LIN9Q5TKA1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LIN9Q5TKA1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LIN9Q5TKA1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
LIN9Q5TKA1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
LIN9Q5TKA1 AC034268.1-201ENST00000441047 882 ntBASIC23.66■■□□□ 1.38
LIN9Q5TKA1 YBX1P1-201ENST00000445822 960 ntBASIC23.66■■□□□ 1.38
LIN9Q5TKA1 IGHV3-19-201ENST00000521488 291 ntBASIC23.66■■□□□ 1.38
LIN9Q5TKA1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
LIN9Q5TKA1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
LIN9Q5TKA1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.66■■□□□ 1.38
LIN9Q5TKA1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LIN9Q5TKA1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.66■■□□□ 1.38
LIN9Q5TKA1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.66■■□□□ 1.38
LIN9Q5TKA1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.66■■□□□ 1.38
LIN9Q5TKA1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LIN9Q5TKA1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.65■■□□□ 1.38
LIN9Q5TKA1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
LIN9Q5TKA1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
LIN9Q5TKA1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
LIN9Q5TKA1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.65■■□□□ 1.38
LIN9Q5TKA1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.65■■□□□ 1.38
LIN9Q5TKA1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.65■■□□□ 1.38
LIN9Q5TKA1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LIN9Q5TKA1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.65■■□□□ 1.38
LIN9Q5TKA1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LIN9Q5TKA1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
LIN9Q5TKA1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LIN9Q5TKA1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.64■■□□□ 1.38
LIN9Q5TKA1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
LIN9Q5TKA1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.64■■□□□ 1.38
LIN9Q5TKA1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.64■■□□□ 1.38
LIN9Q5TKA1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LIN9Q5TKA1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.64■■□□□ 1.37
LIN9Q5TKA1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LIN9Q5TKA1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LIN9Q5TKA1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.64■■□□□ 1.37
LIN9Q5TKA1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.64■■□□□ 1.37
LIN9Q5TKA1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LIN9Q5TKA1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.64■■□□□ 1.37
LIN9Q5TKA1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.64■■□□□ 1.37
LIN9Q5TKA1 AL358852.1-201ENST00000623174 1268 ntBASIC23.64■■□□□ 1.37
LIN9Q5TKA1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
LIN9Q5TKA1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
LIN9Q5TKA1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LIN9Q5TKA1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
LIN9Q5TKA1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LIN9Q5TKA1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
LIN9Q5TKA1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.63■■□□□ 1.37
LIN9Q5TKA1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LIN9Q5TKA1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.63■■□□□ 1.37
LIN9Q5TKA1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
LIN9Q5TKA1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.63■■□□□ 1.37
LIN9Q5TKA1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
LIN9Q5TKA1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
LIN9Q5TKA1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
LIN9Q5TKA1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LIN9Q5TKA1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
LIN9Q5TKA1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
LIN9Q5TKA1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.62■■□□□ 1.37
LIN9Q5TKA1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LIN9Q5TKA1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LIN9Q5TKA1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
LIN9Q5TKA1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LIN9Q5TKA1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
LIN9Q5TKA1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LIN9Q5TKA1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
LIN9Q5TKA1 C1orf229-201ENST00000623686 2258 ntBASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 998.4 ms