Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP6AP1LQ52LC2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.14■□□□□ 0.97
ATP6AP1LQ52LC2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ATP6AP1LQ52LC2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP6AP1LQ52LC2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ATP6AP1LQ52LC2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP6AP1LQ52LC2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP6AP1LQ52LC2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.14■□□□□ 0.97
ATP6AP1LQ52LC2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 FBXW4P1-201ENST00000426721 2239 ntBASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP6AP1LQ52LC2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6AP1LQ52LC2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6AP1LQ52LC2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6AP1LQ52LC2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6AP1LQ52LC2 AC004687.1-201ENST00000579003 1625 ntBASIC21.12■□□□□ 0.97
ATP6AP1LQ52LC2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6AP1LQ52LC2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6AP1LQ52LC2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ATP6AP1LQ52LC2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6AP1LQ52LC2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ATP6AP1LQ52LC2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6AP1LQ52LC2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP6AP1LQ52LC2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP6AP1LQ52LC2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP6AP1LQ52LC2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6AP1LQ52LC2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
ATP6AP1LQ52LC2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ATP6AP1LQ52LC2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP6AP1LQ52LC2 MIR4787-201ENST00000607364 84 ntBASIC21.1■□□□□ 0.97
ATP6AP1LQ52LC2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP6AP1LQ52LC2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP6AP1LQ52LC2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6AP1LQ52LC2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP6AP1LQ52LC2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP6AP1LQ52LC2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP6AP1LQ52LC2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.97
ATP6AP1LQ52LC2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP6AP1LQ52LC2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP6AP1LQ52LC2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.08■□□□□ 0.96
ATP6AP1LQ52LC2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms