Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCGF3Q3KNV8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCGF3Q3KNV8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCGF3Q3KNV8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.3■□□□□ 0.68
PCGF3Q3KNV8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCGF3Q3KNV8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.29■□□□□ 0.68
PCGF3Q3KNV8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCGF3Q3KNV8 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.29■□□□□ 0.68
PCGF3Q3KNV8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCGF3Q3KNV8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCGF3Q3KNV8 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.29■□□□□ 0.68
PCGF3Q3KNV8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF3Q3KNV8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF3Q3KNV8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.28■□□□□ 0.68
PCGF3Q3KNV8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF3Q3KNV8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF3Q3KNV8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF3Q3KNV8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.28■□□□□ 0.68
PCGF3Q3KNV8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.28■□□□□ 0.68
PCGF3Q3KNV8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF3Q3KNV8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.28■□□□□ 0.68
PCGF3Q3KNV8 AL137060.1-201ENST00000618151 2648 ntBASIC19.28■□□□□ 0.68
PCGF3Q3KNV8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCGF3Q3KNV8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCGF3Q3KNV8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.27■□□□□ 0.68
PCGF3Q3KNV8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCGF3Q3KNV8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCGF3Q3KNV8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCGF3Q3KNV8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCGF3Q3KNV8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.27■□□□□ 0.68
PCGF3Q3KNV8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.27■□□□□ 0.68
PCGF3Q3KNV8 AC092171.4-201ENST00000609130 632 ntBASIC19.27■□□□□ 0.68
PCGF3Q3KNV8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCGF3Q3KNV8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.27■□□□□ 0.68
PCGF3Q3KNV8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PCGF3Q3KNV8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCGF3Q3KNV8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCGF3Q3KNV8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCGF3Q3KNV8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCGF3Q3KNV8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCGF3Q3KNV8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.26■□□□□ 0.67
PCGF3Q3KNV8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCGF3Q3KNV8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCGF3Q3KNV8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.26■□□□□ 0.67
PCGF3Q3KNV8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCGF3Q3KNV8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCGF3Q3KNV8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.26■□□□□ 0.67
PCGF3Q3KNV8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.26■□□□□ 0.67
PCGF3Q3KNV8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
PCGF3Q3KNV8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCGF3Q3KNV8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.25■□□□□ 0.67
PCGF3Q3KNV8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 ESRRAP2-201ENST00000418437 1549 ntBASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.24■□□□□ 0.67
PCGF3Q3KNV8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 DUX4L19-201ENST00000557448 1267 ntBASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.23■□□□□ 0.67
PCGF3Q3KNV8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms