Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 YBR053CYBR053C 1077 nt5.12□□□□□ -1.59
NPL3Q01560 YNL095CYNL095C 1929 nt5.12□□□□□ -1.59
NPL3Q01560 EXO1YOR033C 2109 nt5.12□□□□□ -1.59
NPL3Q01560 APN2YBL019W 1563 nt5.12□□□□□ -1.59
NPL3Q01560 SNF3YDL194W 2655 nt5.11□□□□□ -1.59
NPL3Q01560 YCR007CYCR007C 720 nt5.11□□□□□ -1.59
NPL3Q01560 PDS1YDR113C 1122 nt5.11□□□□□ -1.59
NPL3Q01560 IRC22YEL001C 678 nt5.11□□□□□ -1.59
NPL3Q01560 UBC8YEL012W 657 nt5.11□□□□□ -1.59
NPL3Q01560 TOS8YGL096W 831 nt5.11□□□□□ -1.59
NPL3Q01560 DAM1YGR113W 1032 nt5.11□□□□□ -1.59 RIP-Chip
NPL3Q01560 YGR226CYGR226C 210 nt5.11□□□□□ -1.59
NPL3Q01560 DBP8YHR169W 1296 nt5.11□□□□□ -1.59
NPL3Q01560 PRP45YAL032C 1140 nt5.11□□□□□ -1.59
NPL3Q01560 PNG1YPL096W 1092 nt5.11□□□□□ -1.59
NPL3Q01560 ERT1YBR239C 1590 nt5.11□□□□□ -1.59
NPL3Q01560 BRF1YGR246C 1791 nt5.11□□□□□ -1.59
NPL3Q01560 CDC9YDL164C 2268 nt5.11□□□□□ -1.59
NPL3Q01560 RUB1YDR139C 234 nt5.1□□□□□ -1.59 RIP-Chip
NPL3Q01560 SUR2YDR297W 1050 nt5.1□□□□□ -1.59 RIP-Chip
NPL3Q01560 ATE1YGL017W 1512 nt5.1□□□□□ -1.59
NPL3Q01560 PRP38YGR075C 729 nt5.1□□□□□ -1.59
NPL3Q01560 GCD14YJL125C 1152 nt5.1□□□□□ -1.59
NPL3Q01560 CYC1YJR048W 330 nt5.1□□□□□ -1.59
NPL3Q01560 YLR125WYLR125W 411 nt5.1□□□□□ -1.59
NPL3Q01560 EOS1YNL080C 1101 nt5.1□□□□□ -1.59
NPL3Q01560 RUF22RUF22 515 nt5.1□□□□□ -1.59
NPL3Q01560 MCK1YNL307C 1128 nt5.1□□□□□ -1.59
NPL3Q01560 YOR034C-AYOR034C-A 243 nt5.1□□□□□ -1.59
NPL3Q01560 SME1YOR159C 285 nt5.1□□□□□ -1.59 RIP-Chip
NPL3Q01560 DCC1YCL016C 1143 nt5.1□□□□□ -1.59 RIP-Chip
NPL3Q01560 ACS2YLR153C 2052 nt5.09□□□□□ -1.59
NPL3Q01560 DSS1YMR287C 2910 nt5.09□□□□□ -1.59
NPL3Q01560 YEL053W-AYEL053W-A 348 nt5.09□□□□□ -1.59
NPL3Q01560 YFR052C-AYFR052C-A 306 nt5.09□□□□□ -1.59
NPL3Q01560 COS8YHL048W 1146 nt5.09□□□□□ -1.59 RIP-Chip
NPL3Q01560 BAT2YJR148W 1131 nt5.09□□□□□ -1.59
NPL3Q01560 MET14YKL001C 609 nt5.09□□□□□ -1.59
NPL3Q01560 CUP9YPL177C 921 nt5.09□□□□□ -1.59
NPL3Q01560 OPY1YBR129C 987 nt5.09□□□□□ -1.59
NPL3Q01560 BUD7YOR299W 2241 nt5.09□□□□□ -1.59
NPL3Q01560 YFL034WYFL034W 3222 nt5.09□□□□□ -1.59
NPL3Q01560 GLT1YDL171C 6438 nt5.09□□□□□ -1.59
NPL3Q01560 SPB4YFL002C 1821 nt5.09□□□□□ -1.6
NPL3Q01560 RPT4YOR259C 1314 nt5.08□□□□□ -1.6
NPL3Q01560 GCS1YDL226C 1059 nt5.08□□□□□ -1.6
NPL3Q01560 LSM4YER112W 564 nt5.08□□□□□ -1.6 RIP-Chip
NPL3Q01560 YIP5YGL161C 933 nt5.08□□□□□ -1.6
NPL3Q01560 CMS1YLR003C 876 nt5.08□□□□□ -1.6
NPL3Q01560 ATP14YLR295C 375 nt5.08□□□□□ -1.6 RIP-Chip
NPL3Q01560 SNF8YPL002C 702 nt5.08□□□□□ -1.6
NPL3Q01560 CEX1YOR112W 2286 nt5.08□□□□□ -1.6
NPL3Q01560 CET1YPL228W 1650 nt5.08□□□□□ -1.6
NPL3Q01560 CYK3YDL117W 2658 nt5.08□□□□□ -1.6
NPL3Q01560 AVT3YKL146W 2079 nt5.08□□□□□ -1.6
NPL3Q01560 RKM2YDR198C 1440 nt5.07□□□□□ -1.6
NPL3Q01560 TRE1YPL176C 2352 nt5.07□□□□□ -1.6
NPL3Q01560 RIM15YFL033C 5313 nt5.07□□□□□ -1.6
NPL3Q01560 APP1YNL094W 1764 nt5.07□□□□□ -1.6
NPL3Q01560 COT1YOR316C 1320 nt5.07□□□□□ -1.6
NPL3Q01560 PET100YDR079W 336 nt5.07□□□□□ -1.6 RIP-Chip
NPL3Q01560 GRX3YDR098C 858 nt5.07□□□□□ -1.6
NPL3Q01560 YFL051CYFL051C 483 nt5.07□□□□□ -1.6
NPL3Q01560 YGL041W-AYGL041W-A 465 nt5.07□□□□□ -1.6
NPL3Q01560 ATG38YLR211C 681 nt5.07□□□□□ -1.6
NPL3Q01560 MCM1YMR043W 861 nt5.07□□□□□ -1.6 RIP-Chip
NPL3Q01560 DLT1YMR126C 1029 nt5.07□□□□□ -1.6
NPL3Q01560 RPA49YNL248C 1248 nt5.07□□□□□ -1.6
NPL3Q01560 MDY2YOL111C 639 nt5.07□□□□□ -1.6 RIP-Chip
NPL3Q01560 CUE5YOR042W 1236 nt5.07□□□□□ -1.6
NPL3Q01560 GAL10YBR019C 2100 nt5.07□□□□□ -1.6
NPL3Q01560 YPR147CYPR147C 915 nt5.07□□□□□ -1.6
NPL3Q01560 SAC1YKL212W 1872 nt5.07□□□□□ -1.6
NPL3Q01560 BUD14YAR014C 2130 nt5.06□□□□□ -1.6
NPL3Q01560 RPL13AYDL082W 600 nt5.06□□□□□ -1.6
NPL3Q01560 COS12YGL263W 1143 nt5.06□□□□□ -1.6
NPL3Q01560 YGR016WYGR016W 573 nt5.06□□□□□ -1.6
NPL3Q01560 TEF4YKL081W 1239 nt5.06□□□□□ -1.6
NPL3Q01560 MBR1YKL093W 1020 nt5.06□□□□□ -1.6
NPL3Q01560 YMR085WYMR085W 1299 nt5.06□□□□□ -1.6
NPL3Q01560 TOM7YNL070W 183 nt5.06□□□□□ -1.6
NPL3Q01560 PPG1YNR032W 1107 nt5.06□□□□□ -1.6
NPL3Q01560 USV1YPL230W 1176 nt5.06□□□□□ -1.6
NPL3Q01560 VPS69YPR087W 321 nt5.06□□□□□ -1.6
NPL3Q01560 MRPL27YBR282W 441 nt5.06□□□□□ -1.6
NPL3Q01560 YCL007CYCL007C 393 nt5.06□□□□□ -1.6
NPL3Q01560 MCX1YBR227C 1563 nt5.06□□□□□ -1.6
NPL3Q01560 PDI1YCL043C 1569 nt5.06□□□□□ -1.6
NPL3Q01560 SST2YLR452C 2097 nt5.06□□□□□ -1.6
NPL3Q01560 GRS1YBR121C 2004 nt5.06□□□□□ -1.6
NPL3Q01560 FAR10YLR238W 1437 nt5.06□□□□□ -1.6
NPL3Q01560 NHP10YDL002C 612 nt5.05□□□□□ -1.6 RIP-Chip
NPL3Q01560 PRE1YER012W 597 nt5.05□□□□□ -1.6
NPL3Q01560 YFL012W-AYFL012W-A 375 nt5.05□□□□□ -1.6
NPL3Q01560 YGL242CYGL242C 546 nt5.05□□□□□ -1.6
NPL3Q01560 SCM4YGR049W 564 nt5.05□□□□□ -1.6 RIP-Chip
NPL3Q01560 TDA10YGR205W 873 nt5.05□□□□□ -1.6
NPL3Q01560 ECM15YBL001C 315 nt5.05□□□□□ -1.6 RIP-Chip
NPL3Q01560 YMR187CYMR187C 1296 nt5.05□□□□□ -1.6
NPL3Q01560 COS1YNL336W 1146 nt5.05□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms