Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 PRP45YAL032C 1140 nt5.55□□□□□ -1.52
UBP3Q01477 YPL062WYPL062W 405 nt5.55□□□□□ -1.52
UBP3Q01477 YPL199CYPL199C 723 nt5.55□□□□□ -1.52
UBP3Q01477 CCL1YPR025C 1182 nt5.55□□□□□ -1.52
UBP3Q01477 RPS9BYBR189W 588 nt5.55□□□□□ -1.52
UBP3Q01477 snR44snR44 211 nt5.55□□□□□ -1.52
UBP3Q01477 REF2YDR195W 1602 nt5.55□□□□□ -1.52
UBP3Q01477 YTM1YOR272W 1383 nt5.55□□□□□ -1.52
UBP3Q01477 SPT14YPL175W 1359 nt5.55□□□□□ -1.52
UBP3Q01477 HUL4YJR036C 2679 nt5.54□□□□□ -1.52 RIP-Chip
UBP3Q01477 FZO1YBR179C 2568 nt5.54□□□□□ -1.52
UBP3Q01477 YCR108CYCR108C 192 nt5.54□□□□□ -1.52
UBP3Q01477 YFL012W-AYFL012W-A 375 nt5.54□□□□□ -1.52
UBP3Q01477 YFL064CYFL064C 525 nt5.54□□□□□ -1.52
UBP3Q01477 EMC4YGL231C 573 nt5.54□□□□□ -1.52
UBP3Q01477 MTW1YAL034W-A 870 nt5.54□□□□□ -1.52
UBP3Q01477 SWD2YKL018W 990 nt5.54□□□□□ -1.52 RIP-Chip
UBP3Q01477 YKR041WYKR041W 753 nt5.54□□□□□ -1.52
UBP3Q01477 TDA5YLR426W 981 nt5.54□□□□□ -1.52
UBP3Q01477 PPG1YNR032W 1107 nt5.54□□□□□ -1.52
UBP3Q01477 YPR145C-AYPR145C-A 237 nt5.54□□□□□ -1.52
UBP3Q01477 ARA1YBR149W 1035 nt5.54□□□□□ -1.52
UBP3Q01477 IMA1YGR287C 1770 nt5.54□□□□□ -1.52 RIP-Chip
UBP3Q01477 BI3Q0115 1554 nt5.54□□□□□ -1.52
UBP3Q01477 AVT3YKL146W 2079 nt5.54□□□□□ -1.52
UBP3Q01477 YMR111CYMR111C 1389 nt5.54□□□□□ -1.52
UBP3Q01477 KTR6YPL053C 1341 nt5.53□□□□□ -1.52
UBP3Q01477 HIR2YOR038C 2628 nt5.53□□□□□ -1.52 RIP-Chip
UBP3Q01477 HPR1YDR138W 2259 nt5.53□□□□□ -1.52 RIP-Chip
UBP3Q01477 YDR056CYDR056C 618 nt5.53□□□□□ -1.52 RIP-Chip
UBP3Q01477 YIL030W-AYIL030W-A 339 nt5.53□□□□□ -1.52
UBP3Q01477 AIM22YJL046W 1230 nt5.53□□□□□ -1.52
UBP3Q01477 SER1YOR184W 1188 nt5.53□□□□□ -1.52 RIP-Chip
UBP3Q01477 GAL7YBR018C 1101 nt5.53□□□□□ -1.52 RIP-Chip
UBP3Q01477 PNG1YPL096W 1092 nt5.53□□□□□ -1.52
UBP3Q01477 SPP381YBR152W 876 nt5.53□□□□□ -1.52
UBP3Q01477 YCL007CYCL007C 393 nt5.53□□□□□ -1.52
UBP3Q01477 SPR3YGR059W 1539 nt5.53□□□□□ -1.52 RIP-Chip
UBP3Q01477 PMS1YNL082W 2622 nt5.52□□□□□ -1.53 RIP-Chip
UBP3Q01477 RVS161YCR009C 798 nt5.52□□□□□ -1.53
UBP3Q01477 YDR134CYDR134C 411 nt5.52□□□□□ -1.53
UBP3Q01477 GIM4YEL003W 336 nt5.52□□□□□ -1.53
UBP3Q01477 NAG1YGR031C-A 492 nt5.52□□□□□ -1.53
UBP3Q01477 EFG1YGR271C-A 702 nt5.52□□□□□ -1.53
UBP3Q01477 IRC9YJL142C 393 nt5.52□□□□□ -1.53
UBP3Q01477 RNA1YMR235C 1224 nt5.52□□□□□ -1.53
UBP3Q01477 FRE3YOR381W 2136 nt5.52□□□□□ -1.53
UBP3Q01477 ELP2YGR200C 2367 nt5.52□□□□□ -1.53
UBP3Q01477 CTK1YKL139W 1587 nt5.51□□□□□ -1.53 RIP-Chip
UBP3Q01477 FMP30YPL103C 1407 nt5.51□□□□□ -1.53
UBP3Q01477 NSE4YDL105W 1209 nt5.51□□□□□ -1.53
UBP3Q01477 SHU2YDR078C 672 nt5.51□□□□□ -1.53
UBP3Q01477 PDS1YDR113C 1122 nt5.51□□□□□ -1.53
UBP3Q01477 ERD1YDR414C 1089 nt5.51□□□□□ -1.53
UBP3Q01477 YIL025CYIL025C 375 nt5.51□□□□□ -1.53
UBP3Q01477 YJR157WYJR157W 363 nt5.51□□□□□ -1.53
UBP3Q01477 ATG34YOL083W 1239 nt5.51□□□□□ -1.53
UBP3Q01477 FIG1YBR040W 897 nt5.51□□□□□ -1.53
UBP3Q01477 YBR071WYBR071W 636 nt5.51□□□□□ -1.53
UBP3Q01477 SSY5YJL156C 2100 nt5.51□□□□□ -1.53
UBP3Q01477 PRO2YOR323C 1371 nt5.51□□□□□ -1.53 RIP-Chip
UBP3Q01477 APJ1YNL077W 1587 nt5.5□□□□□ -1.53 RIP-Chip
UBP3Q01477 COT1YOR316C 1320 nt5.5□□□□□ -1.53
UBP3Q01477 GZF3YJL110C 1656 nt5.5□□□□□ -1.53
UBP3Q01477 MCM2YBL023C 2607 nt5.5□□□□□ -1.53
UBP3Q01477 SEC39YLR440C 2130 nt5.5□□□□□ -1.53 RIP-Chip
UBP3Q01477 STB2YMR053C 2553 nt5.5□□□□□ -1.53
UBP3Q01477 YAP1YML007W 1953 nt5.5□□□□□ -1.53 RIP-Chip
UBP3Q01477 MEI4YER044C-A 1227 nt5.5□□□□□ -1.53
UBP3Q01477 YGL117WYGL117W 798 nt5.5□□□□□ -1.53
UBP3Q01477 PRM10YJL108C 1152 nt5.5□□□□□ -1.53
UBP3Q01477 KTI12YKL110C 942 nt5.5□□□□□ -1.53
UBP3Q01477 DCS1YLR270W 1053 nt5.5□□□□□ -1.53
UBP3Q01477 SEC14YMR079W 915 nt5.5□□□□□ -1.53
UBP3Q01477 SPG4YMR107W 348 nt5.5□□□□□ -1.53
UBP3Q01477 TUM1YOR251C 915 nt5.5□□□□□ -1.53
UBP3Q01477 YOR338WYOR338W 1092 nt5.5□□□□□ -1.53
UBP3Q01477 BCS1YDR375C 1371 nt5.5□□□□□ -1.53
UBP3Q01477 YGR226CYGR226C 210 nt5.49□□□□□ -1.53
UBP3Q01477 RRF1YHR038W 693 nt5.49□□□□□ -1.53
UBP3Q01477 YRA2YKL214C 612 nt5.49□□□□□ -1.53
UBP3Q01477 YMR130WYMR130W 909 nt5.49□□□□□ -1.53 RIP-Chip
UBP3Q01477 YNL013CYNL013C 378 nt5.49□□□□□ -1.53
UBP3Q01477 APP1YNL094W 1764 nt5.48□□□□□ -1.53 RIP-Chip
UBP3Q01477 SRB5YGR104C 924 nt5.48□□□□□ -1.53
UBP3Q01477 CSI2YOL007C 1026 nt5.48□□□□□ -1.53
UBP3Q01477 TRS33YOR115C 807 nt5.48□□□□□ -1.53
UBP3Q01477 YPR012WYPR012W 255 nt5.48□□□□□ -1.53
UBP3Q01477 TRE2YOR256C 2430 nt5.48□□□□□ -1.53 RIP-Chip
UBP3Q01477 YJR015WYJR015W 1533 nt5.48□□□□□ -1.53
UBP3Q01477 VID30YGL227W 2877 nt5.47□□□□□ -1.53
UBP3Q01477 YDR274CYDR274C 372 nt5.47□□□□□ -1.53
UBP3Q01477 LPP1YDR503C 825 nt5.47□□□□□ -1.53
UBP3Q01477 MTC7YEL033W 420 nt5.47□□□□□ -1.53
UBP3Q01477 YFR009W-AYFR009W-A 258 nt5.47□□□□□ -1.53
UBP3Q01477 YGR115CYGR115C 780 nt5.47□□□□□ -1.53
UBP3Q01477 GIC1YHR061C 945 nt5.47□□□□□ -1.53
UBP3Q01477 ERG3YLR056W 1098 nt5.47□□□□□ -1.53
UBP3Q01477 RPN13YLR421C 471 nt5.47□□□□□ -1.53
UBP3Q01477 AIM36YMR157C 768 nt5.47□□□□□ -1.53 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 91.2 ms