Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
SPCS3P61009 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SPCS3P61009 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.74■□□□□ 0.43
SPCS3P61009 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPCS3P61009 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPCS3P61009 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPCS3P61009 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPCS3P61009 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.73■□□□□ 0.43
SPCS3P61009 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPCS3P61009 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPCS3P61009 TSPY13P-201ENST00000338964 914 ntBASIC17.73■□□□□ 0.43
SPCS3P61009 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.73■□□□□ 0.43
SPCS3P61009 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.73■□□□□ 0.43
SPCS3P61009 MIR4508-201ENST00000584178 70 ntBASIC17.73■□□□□ 0.43
SPCS3P61009 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPCS3P61009 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPCS3P61009 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPCS3P61009 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SPCS3P61009 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPCS3P61009 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPCS3P61009 LINC01529-204ENST00000636474 1715 ntBASIC17.72■□□□□ 0.43
SPCS3P61009 AC007375.3-201ENST00000600936 2314 ntBASIC17.72■□□□□ 0.43
SPCS3P61009 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPCS3P61009 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPCS3P61009 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPCS3P61009 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPCS3P61009 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.72■□□□□ 0.43
SPCS3P61009 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPCS3P61009 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPCS3P61009 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.72■□□□□ 0.43
SPCS3P61009 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.72■□□□□ 0.43
SPCS3P61009 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.72■□□□□ 0.43
SPCS3P61009 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPCS3P61009 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SPCS3P61009 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPCS3P61009 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.72■□□□□ 0.43
SPCS3P61009 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPCS3P61009 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPCS3P61009 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPCS3P61009 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPCS3P61009 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SPCS3P61009 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.71■□□□□ 0.43
SPCS3P61009 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SPCS3P61009 FP325331.1-202ENST00000623531 1380 ntBASIC17.71■□□□□ 0.43
SPCS3P61009 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPCS3P61009 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPCS3P61009 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.71■□□□□ 0.43
SPCS3P61009 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPCS3P61009 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.71■□□□□ 0.43
SPCS3P61009 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.71■□□□□ 0.43
SPCS3P61009 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.71■□□□□ 0.43
SPCS3P61009 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPCS3P61009 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.71■□□□□ 0.43
SPCS3P61009 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SPCS3P61009 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.71■□□□□ 0.43
SPCS3P61009 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SPCS3P61009 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.71■□□□□ 0.42
SPCS3P61009 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SPCS3P61009 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPCS3P61009 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPCS3P61009 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPCS3P61009 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SPCS3P61009 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SPCS3P61009 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SPCS3P61009 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPCS3P61009 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPCS3P61009 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPCS3P61009 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.7■□□□□ 0.42
SPCS3P61009 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPCS3P61009 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPCS3P61009 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPCS3P61009 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.69■□□□□ 0.42
SPCS3P61009 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPCS3P61009 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPCS3P61009 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.69■□□□□ 0.42
SPCS3P61009 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPCS3P61009 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SPCS3P61009 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPCS3P61009 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPCS3P61009 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SPCS3P61009 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPCS3P61009 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.69■□□□□ 0.42
SPCS3P61009 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPCS3P61009 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPCS3P61009 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SPCS3P61009 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.69■□□□□ 0.42
SPCS3P61009 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPCS3P61009 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPCS3P61009 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.68■□□□□ 0.42
SPCS3P61009 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPCS3P61009 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SPCS3P61009 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SPCS3P61009 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPCS3P61009 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPCS3P61009 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPCS3P61009 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SPCS3P61009 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.68■□□□□ 0.42
SPCS3P61009 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SPCS3P61009 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SPCS3P61009 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms