Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SEC61BP60468 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SEC61BP60468 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SEC61BP60468 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SEC61BP60468 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SEC61BP60468 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC11.79□□□□□ -0.52
SEC61BP60468 AC137761.2-201ENST00000561729 223 ntBASIC11.79□□□□□ -0.52
SEC61BP60468 AC145350.3-201ENST00000569033 163 ntBASIC11.79□□□□□ -0.52
SEC61BP60468 GALNS-213ENST00000569433 723 ntTSL 3 BASIC11.79□□□□□ -0.52
SEC61BP60468 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC11.79□□□□□ -0.52
SEC61BP60468 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SEC61BP60468 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SEC61BP60468 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SEC61BP60468 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SEC61BP60468 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SEC61BP60468 BX005040.4-201ENST00000637145 1518 ntBASIC11.79□□□□□ -0.52
SEC61BP60468 AIRN-201ENST00000601203 4374 ntBASIC11.79□□□□□ -0.52
SEC61BP60468 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SEC61BP60468 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SEC61BP60468 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC11.79□□□□□ -0.52
SEC61BP60468 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SEC61BP60468 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC11.79□□□□□ -0.52
SEC61BP60468 GAS2L1P2-201ENST00000436355 1356 ntBASIC11.79□□□□□ -0.52
SEC61BP60468 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC11.79□□□□□ -0.52
SEC61BP60468 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SEC61BP60468 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SEC61BP60468 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC11.78□□□□□ -0.52
SEC61BP60468 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SEC61BP60468 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC11.78□□□□□ -0.52
SEC61BP60468 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SEC61BP60468 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SEC61BP60468 AC138932.3-201ENST00000567634 1902 ntBASIC11.78□□□□□ -0.52
SEC61BP60468 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC11.78□□□□□ -0.52
SEC61BP60468 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SEC61BP60468 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SEC61BP60468 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC11.78□□□□□ -0.52
SEC61BP60468 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SEC61BP60468 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC11.78□□□□□ -0.52
SEC61BP60468 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SEC61BP60468 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SEC61BP60468 COX20-201ENST00000366528 568 ntTSL 2 BASIC11.78□□□□□ -0.52
SEC61BP60468 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SEC61BP60468 KRT19P1-201ENST00000405746 1186 ntBASIC11.78□□□□□ -0.52
SEC61BP60468 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC11.78□□□□□ -0.52
SEC61BP60468 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC11.78□□□□□ -0.52
SEC61BP60468 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SEC61BP60468 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SEC61BP60468 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SEC61BP60468 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SEC61BP60468 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SEC61BP60468 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SEC61BP60468 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SEC61BP60468 SHD-204ENST00000599689 1729 ntTSL 5 BASIC11.77□□□□□ -0.52
SEC61BP60468 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
SEC61BP60468 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SEC61BP60468 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SEC61BP60468 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC11.77□□□□□ -0.53
SEC61BP60468 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
SEC61BP60468 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SEC61BP60468 ID1-201ENST00000376105 1233 ntBASIC11.77□□□□□ -0.53
SEC61BP60468 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SEC61BP60468 KRT18P11-201ENST00000435214 1283 ntBASIC11.77□□□□□ -0.53
SEC61BP60468 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC11.77□□□□□ -0.53
SEC61BP60468 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
SEC61BP60468 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SEC61BP60468 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC11.77□□□□□ -0.53
SEC61BP60468 AC092437.1-201ENST00000624794 1048 ntBASIC11.77□□□□□ -0.53
SEC61BP60468 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SEC61BP60468 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SEC61BP60468 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
SEC61BP60468 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
SEC61BP60468 AC004687.1-201ENST00000579003 1625 ntBASIC11.77□□□□□ -0.53
SEC61BP60468 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SEC61BP60468 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SEC61BP60468 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC11.77□□□□□ -0.53
SEC61BP60468 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC11.77□□□□□ -0.53
SEC61BP60468 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SEC61BP60468 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SEC61BP60468 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SEC61BP60468 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC11.76□□□□□ -0.53
SEC61BP60468 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC11.76□□□□□ -0.53
SEC61BP60468 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SEC61BP60468 MED17-227ENST00000640521 2047 ntTSL 5 BASIC11.76□□□□□ -0.53
SEC61BP60468 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC11.76□□□□□ -0.53
SEC61BP60468 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC11.76□□□□□ -0.53
SEC61BP60468 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC11.76□□□□□ -0.53
SEC61BP60468 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC11.76□□□□□ -0.53
SEC61BP60468 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SEC61BP60468 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SEC61BP60468 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SEC61BP60468 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC11.76□□□□□ -0.53
SEC61BP60468 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC11.76□□□□□ -0.53
SEC61BP60468 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
SEC61BP60468 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SEC61BP60468 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SEC61BP60468 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SEC61BP60468 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SEC61BP60468 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SEC61BP60468 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SEC61BP60468 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms