Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN20P56880 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.03■□□□□ 0.8
CLDN20P56880 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN20P56880 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN20P56880 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN20P56880 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CLDN20P56880 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN20P56880 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN20P56880 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
CLDN20P56880 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CLDN20P56880 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CLDN20P56880 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.02■□□□□ 0.8
CLDN20P56880 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN20P56880 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN20P56880 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.02■□□□□ 0.79
CLDN20P56880 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.02■□□□□ 0.79
CLDN20P56880 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN20P56880 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN20P56880 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN20P56880 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN20P56880 EDA-201ENST00000338901 1233 ntBASIC20.01■□□□□ 0.79
CLDN20P56880 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN20P56880 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.01■□□□□ 0.79
CLDN20P56880 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.01■□□□□ 0.79
CLDN20P56880 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.01■□□□□ 0.79
CLDN20P56880 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.01■□□□□ 0.79
CLDN20P56880 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.01■□□□□ 0.79
CLDN20P56880 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.01■□□□□ 0.79
CLDN20P56880 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN20P56880 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.01■□□□□ 0.79
CLDN20P56880 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN20P56880 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN20P56880 AC007375.3-201ENST00000600936 2314 ntBASIC20.01■□□□□ 0.79
CLDN20P56880 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN20P56880 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
CLDN20P56880 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN20P56880 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN20P56880 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN20P56880 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN20P56880 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20■□□□□ 0.79
CLDN20P56880 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20■□□□□ 0.79
CLDN20P56880 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN20P56880 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN20P56880 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN20P56880 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN20P56880 AC092068.2-201ENST00000590491 1708 ntBASIC20■□□□□ 0.79
CLDN20P56880 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CLDN20P56880 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN20P56880 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20■□□□□ 0.79
CLDN20P56880 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN20P56880 AL355001.2-201ENST00000620617 1191 ntBASIC20■□□□□ 0.79
CLDN20P56880 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLDN20P56880 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20■□□□□ 0.79
CLDN20P56880 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN20P56880 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20■□□□□ 0.79
CLDN20P56880 AC133637.1-201ENST00000624115 1537 ntBASIC20■□□□□ 0.79
CLDN20P56880 AC019069.1-201ENST00000610008 1333 ntBASIC20■□□□□ 0.79
CLDN20P56880 WWC2-AS2-201ENST00000578387 2183 ntBASIC20■□□□□ 0.79
CLDN20P56880 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLDN20P56880 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLDN20P56880 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.99■□□□□ 0.79
CLDN20P56880 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.99■□□□□ 0.79
CLDN20P56880 SUDS3P1-201ENST00000505831 966 ntBASIC19.99■□□□□ 0.79
CLDN20P56880 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.99■□□□□ 0.79
CLDN20P56880 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.99■□□□□ 0.79
CLDN20P56880 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.99■□□□□ 0.79
CLDN20P56880 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CLDN20P56880 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN20P56880 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLDN20P56880 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLDN20P56880 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN20P56880 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN20P56880 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN20P56880 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN20P56880 AC142381.2-201ENST00000566120 298 ntBASIC19.98■□□□□ 0.79
CLDN20P56880 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.98■□□□□ 0.79
CLDN20P56880 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.98■□□□□ 0.79
CLDN20P56880 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLDN20P56880 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN20P56880 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CLDN20P56880 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN20P56880 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN20P56880 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN20P56880 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLDN20P56880 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.98■□□□□ 0.79
CLDN20P56880 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN20P56880 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms