Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RAB5CP51148 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5CP51148 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB5CP51148 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5CP51148 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5CP51148 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5CP51148 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RAB5CP51148 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB5CP51148 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAB5CP51148 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB5CP51148 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5CP51148 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB5CP51148 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAB5CP51148 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5CP51148 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5CP51148 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAB5CP51148 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAB5CP51148 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RAB5CP51148 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB5CP51148 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
RAB5CP51148 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5CP51148 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB5CP51148 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5CP51148 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5CP51148 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5CP51148 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAB5CP51148 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB5CP51148 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RAB5CP51148 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5CP51148 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB5CP51148 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
RAB5CP51148 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB5CP51148 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAB5CP51148 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAB5CP51148 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RAB5CP51148 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RAB5CP51148 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAB5CP51148 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB5CP51148 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAB5CP51148 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.58■□□□□ 0.4
RAB5CP51148 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB5CP51148 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB5CP51148 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5CP51148 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB5CP51148 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5CP51148 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5CP51148 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5CP51148 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5CP51148 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5CP51148 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5CP51148 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5CP51148 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5CP51148 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
RAB5CP51148 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.57■□□□□ 0.4
RAB5CP51148 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB5CP51148 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.57■□□□□ 0.4
RAB5CP51148 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAB5CP51148 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB5CP51148 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RAB5CP51148 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB5CP51148 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB5CP51148 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB5CP51148 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB5CP51148 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAB5CP51148 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RAB5CP51148 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAB5CP51148 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.56■□□□□ 0.4
RAB5CP51148 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB5CP51148 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB5CP51148 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB5CP51148 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB5CP51148 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB5CP51148 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
RAB5CP51148 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB5CP51148 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAB5CP51148 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB5CP51148 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB5CP51148 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5CP51148 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5CP51148 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5CP51148 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB5CP51148 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
RAB5CP51148 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB5CP51148 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5CP51148 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5CP51148 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5CP51148 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5CP51148 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB5CP51148 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB5CP51148 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB5CP51148 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RAB5CP51148 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RAB5CP51148 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB5CP51148 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RAB5CP51148 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAB5CP51148 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5CP51148 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB5CP51148 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB5CP51148 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB5CP51148 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms