Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CENPAP49450 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CENPAP49450 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CENPAP49450 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.73■□□□□ 0.75
CENPAP49450 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPAP49450 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.73■□□□□ 0.75
CENPAP49450 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.73■□□□□ 0.75
CENPAP49450 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CENPAP49450 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPAP49450 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPAP49450 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPAP49450 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CENPAP49450 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPAP49450 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPAP49450 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
CENPAP49450 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CENPAP49450 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CENPAP49450 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CENPAP49450 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CENPAP49450 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CENPAP49450 AL451085.2-201ENST00000605085 799 ntBASIC19.72■□□□□ 0.75
CENPAP49450 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CENPAP49450 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CENPAP49450 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CENPAP49450 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CENPAP49450 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CENPAP49450 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CENPAP49450 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CENPAP49450 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CENPAP49450 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CENPAP49450 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CENPAP49450 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CENPAP49450 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CENPAP49450 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CENPAP49450 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CENPAP49450 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CENPAP49450 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CENPAP49450 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CENPAP49450 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.71■□□□□ 0.75
CENPAP49450 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CENPAP49450 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CENPAP49450 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CENPAP49450 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CENPAP49450 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CENPAP49450 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.7■□□□□ 0.74
CENPAP49450 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.7■□□□□ 0.74
CENPAP49450 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CENPAP49450 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CENPAP49450 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.7■□□□□ 0.74
CENPAP49450 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CENPAP49450 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CENPAP49450 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CENPAP49450 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPAP49450 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CENPAP49450 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CENPAP49450 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPAP49450 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPAP49450 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPAP49450 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.69■□□□□ 0.74
CENPAP49450 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.69■□□□□ 0.74
CENPAP49450 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.69■□□□□ 0.74
CENPAP49450 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CENPAP49450 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.69■□□□□ 0.74
CENPAP49450 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPAP49450 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CENPAP49450 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CENPAP49450 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CENPAP49450 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.68■□□□□ 0.74
CENPAP49450 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CENPAP49450 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CENPAP49450 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CENPAP49450 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CENPAP49450 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.68■□□□□ 0.74
CENPAP49450 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CENPAP49450 AC009086.3-201ENST00000623486 1008 ntBASIC19.68■□□□□ 0.74
CENPAP49450 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CENPAP49450 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CENPAP49450 AIRN-201ENST00000601203 4374 ntBASIC19.68■□□□□ 0.74
CENPAP49450 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.68■□□□□ 0.74
CENPAP49450 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CENPAP49450 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CENPAP49450 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CENPAP49450 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.67■□□□□ 0.74
CENPAP49450 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CENPAP49450 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.67■□□□□ 0.74
CENPAP49450 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CENPAP49450 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CENPAP49450 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CENPAP49450 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CENPAP49450 DUX4L4-201ENST00000566884 1269 ntBASIC19.67■□□□□ 0.74
CENPAP49450 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CENPAP49450 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CENPAP49450 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CENPAP49450 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CENPAP49450 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CENPAP49450 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CENPAP49450 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.66■□□□□ 0.74
CENPAP49450 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPAP49450 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CENPAP49450 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms