Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 PRM1YNL279W 1986 nt3.89□□□□□ -1.79
SSN8P47821 ZPR1YGR211W 1461 nt3.88□□□□□ -1.79
SSN8P47821 MRPL32YCR003W 552 nt3.88□□□□□ -1.79
SSN8P47821 PHO13YDL236W 939 nt3.88□□□□□ -1.79
SSN8P47821 YDR290WYDR290W 330 nt3.88□□□□□ -1.79
SSN8P47821 YAL069WYAL069W 315 nt3.88□□□□□ -1.79
SSN8P47821 YML090WYML090W 387 nt3.88□□□□□ -1.79
SSN8P47821 RUF20RUF20 443 nt3.88□□□□□ -1.79
SSN8P47821 RPN8YOR261C 1017 nt3.88□□□□□ -1.79
SSN8P47821 YPR142CYPR142C 564 nt3.88□□□□□ -1.79
SSN8P47821 UMP1YBR173C 447 nt3.88□□□□□ -1.79
SSN8P47821 CYM1YDR430C 2970 nt3.88□□□□□ -1.79
SSN8P47821 MNN4YKL201C 3537 nt3.88□□□□□ -1.79
SSN8P47821 RTK1YDL025C 1863 nt3.88□□□□□ -1.79
SSN8P47821 MSC2YDR205W 2175 nt3.87□□□□□ -1.79
SSN8P47821 RKM3YBR030W 1659 nt3.87□□□□□ -1.79
SSN8P47821 MCM7YBR202W 2538 nt3.87□□□□□ -1.79
SSN8P47821 RCM1YNL022C 1473 nt3.87□□□□□ -1.79
SSN8P47821 YCR023CYCR023C 1836 nt3.87□□□□□ -1.79
SSN8P47821 ARF2YDL137W 546 nt3.87□□□□□ -1.79
SSN8P47821 CLC1YGR167W 702 nt3.87□□□□□ -1.79
SSN8P47821 MRP4YHL004W 1185 nt3.87□□□□□ -1.79
SSN8P47821 tR(ACG)JtR(ACG)J 73 nt3.87□□□□□ -1.79
SSN8P47821 FSH1YHR049W 732 nt3.87□□□□□ -1.79
SSN8P47821 YIL025CYIL025C 375 nt3.87□□□□□ -1.79
SSN8P47821 COA3YJL062W-A 258 nt3.87□□□□□ -1.79
SSN8P47821 LSO1YJR005C-A 282 nt3.87□□□□□ -1.79
SSN8P47821 YLR198CYLR198C 360 nt3.87□□□□□ -1.79
SSN8P47821 RNA1YMR235C 1224 nt3.87□□□□□ -1.79
SSN8P47821 YBL059WYBL059W 582 nt3.87□□□□□ -1.79
SSN8P47821 POC4YPL144W 447 nt3.87□□□□□ -1.79
SSN8P47821 ATG29YPL166W 642 nt3.87□□□□□ -1.79
SSN8P47821 GRX1YCL035C 333 nt3.87□□□□□ -1.79
SSN8P47821 IOC2YLR095C 2439 nt3.87□□□□□ -1.79
SSN8P47821 MIH1YMR036C 1665 nt3.87□□□□□ -1.79
SSN8P47821 MAG2YLR427W 2013 nt3.87□□□□□ -1.79
SSN8P47821 STV1YMR054W 2673 nt3.87□□□□□ -1.79
SSN8P47821 PTA1YAL043C 2358 nt3.87□□□□□ -1.79
SSN8P47821 YMR1YJR110W 2067 nt3.86□□□□□ -1.79
SSN8P47821 RPG1YBR079C 2895 nt3.86□□□□□ -1.79
SSN8P47821 PUF2YPR042C 3228 nt3.86□□□□□ -1.79
SSN8P47821 XRS2YDR369C 2565 nt3.86□□□□□ -1.79
SSN8P47821 ALG6YOR002W 1635 nt3.86□□□□□ -1.79
SSN8P47821 YCL068CYCL068C 783 nt3.86□□□□□ -1.79
SSN8P47821 PER1YCR044C 1074 nt3.86□□□□□ -1.79
SSN8P47821 MRPS35YGR165W 1038 nt3.86□□□□□ -1.79
SSN8P47821 snR37snR37 386 nt3.86□□□□□ -1.79
SSN8P47821 SRS2YJL092W 3525 nt3.86□□□□□ -1.79
SSN8P47821 UGA3YDL170W 1587 nt3.85□□□□□ -1.79
SSN8P47821 PTM1YKL039W 1572 nt3.85□□□□□ -1.79
SSN8P47821 snR7-SsnR7-S 179 nt3.85□□□□□ -1.79
SSN8P47821 RNA15YGL044C 891 nt3.85□□□□□ -1.79
SSN8P47821 YAL056C-AYAL056C-A 351 nt3.85□□□□□ -1.79
SSN8P47821 BOI2YER114C 3123 nt3.85□□□□□ -1.79
SSN8P47821 TED1YIL039W 1422 nt3.85□□□□□ -1.79
SSN8P47821 HPR1YDR138W 2259 nt3.84□□□□□ -1.79
SSN8P47821 GZF3YJL110C 1656 nt3.84□□□□□ -1.79
SSN8P47821 TRM1YDR120C 1713 nt3.84□□□□□ -1.79
SSN8P47821 CTH1YDR151C 978 nt3.84□□□□□ -1.79
SSN8P47821 GEP4YHR100C 558 nt3.84□□□□□ -1.79
SSN8P47821 MTD1YKR080W 963 nt3.84□□□□□ -1.79
SSN8P47821 IDP2YLR174W 1239 nt3.84□□□□□ -1.79
SSN8P47821 NMA1YLR328W 1206 nt3.84□□□□□ -1.79
SSN8P47821 YNL162W-AYNL162W-A 219 nt3.84□□□□□ -1.79
SSN8P47821 YBL096CYBL096C 309 nt3.84□□□□□ -1.79
SSN8P47821 INA17YPL099C 549 nt3.84□□□□□ -1.79
SSN8P47821 YGL140CYGL140C 3660 nt3.84□□□□□ -1.8
SSN8P47821 GCD1YOR260W 1737 nt3.84□□□□□ -1.8
SSN8P47821 GAD1YMR250W 1758 nt3.84□□□□□ -1.8
SSN8P47821 BCH2YKR027W 2298 nt3.83□□□□□ -1.8
SSN8P47821 YDR056CYDR056C 618 nt3.83□□□□□ -1.8
SSN8P47821 SPI1YER150W 447 nt3.83□□□□□ -1.8
SSN8P47821 tS(AGA)D3tS(AGA)D3 83 nt3.83□□□□□ -1.8
SSN8P47821 ALB1YJL122W 528 nt3.83□□□□□ -1.8
SSN8P47821 NKP2YLR315W 462 nt3.83□□□□□ -1.8
SSN8P47821 YOR342CYOR342C 960 nt3.83□□□□□ -1.8
SSN8P47821 YPL025CYPL025C 558 nt3.83□□□□□ -1.8
SSN8P47821 NMD3YHR170W 1557 nt3.83□□□□□ -1.8
SSN8P47821 HCA4YJL033W 2313 nt3.83□□□□□ -1.8
SSN8P47821 SYF1YDR416W 2580 nt3.83□□□□□ -1.8
SSN8P47821 PHO87YCR037C 2772 nt3.82□□□□□ -1.8
SSN8P47821 KRI1YNL308C 1776 nt3.82□□□□□ -1.8
SSN8P47821 AIM6YDL237W 1173 nt3.82□□□□□ -1.8
SSN8P47821 RRP8YDR083W 1179 nt3.82□□□□□ -1.8
SSN8P47821 ECM34YHL043W 513 nt3.82□□□□□ -1.8
SSN8P47821 YLR285C-AYLR285C-A 171 nt3.82□□□□□ -1.8
SSN8P47821 PRX1YBL064C 786 nt3.82□□□□□ -1.8
SSN8P47821 IBD2YNL164C 1056 nt3.82□□□□□ -1.8
SSN8P47821 YNL296WYNL296W 315 nt3.82□□□□□ -1.8
SSN8P47821 SPP381YBR152W 876 nt3.82□□□□□ -1.8
SSN8P47821 RTC1YOL138C 4026 nt3.82□□□□□ -1.8
SSN8P47821 TAF6YGL112C 1551 nt3.81□□□□□ -1.8
SSN8P47821 STB3YDR169C 1542 nt3.81□□□□□ -1.8
SSN8P47821 MET17YLR303W 1335 nt3.81□□□□□ -1.8
SSN8P47821 BIK1YCL029C 1323 nt3.81□□□□□ -1.8
SSN8P47821 PAN5YHR063C 1140 nt3.81□□□□□ -1.8
SSN8P47821 OAR1YKL055C 837 nt3.81□□□□□ -1.8
SSN8P47821 USB1YLR132C 873 nt3.81□□□□□ -1.8
SSN8P47821 ATG33YLR356W 594 nt3.81□□□□□ -1.8
SSN8P47821 MGR2YPL098C 342 nt3.81□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms