Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A3P43003 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A3P43003 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.1■□□□□ 0.81
SLC1A3P43003 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A3P43003 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A3P43003 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.1■□□□□ 0.81
SLC1A3P43003 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A3P43003 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A3P43003 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.1■□□□□ 0.81
SLC1A3P43003 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A3P43003 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.1■□□□□ 0.81
SLC1A3P43003 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A3P43003 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A3P43003 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A3P43003 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
SLC1A3P43003 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC1A3P43003 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A3P43003 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A3P43003 AC007375.3-201ENST00000600936 2314 ntBASIC20.09■□□□□ 0.81
SLC1A3P43003 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A3P43003 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC1A3P43003 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC1A3P43003 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.09■□□□□ 0.81
SLC1A3P43003 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC1A3P43003 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.09■□□□□ 0.81
SLC1A3P43003 AC099791.2-201ENST00000605725 427 ntBASIC20.09■□□□□ 0.81
SLC1A3P43003 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.09■□□□□ 0.81
SLC1A3P43003 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SLC1A3P43003 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC1A3P43003 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC1A3P43003 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SLC1A3P43003 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SLC1A3P43003 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC1A3P43003 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC1A3P43003 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC1A3P43003 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.08■□□□□ 0.81
SLC1A3P43003 AC092171.4-201ENST00000609130 632 ntBASIC20.08■□□□□ 0.81
SLC1A3P43003 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC1A3P43003 AC004687.1-201ENST00000579003 1625 ntBASIC20.08■□□□□ 0.8
SLC1A3P43003 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC1A3P43003 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC1A3P43003 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC1A3P43003 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC1A3P43003 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.08■□□□□ 0.8
SLC1A3P43003 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC1A3P43003 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A3P43003 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A3P43003 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A3P43003 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A3P43003 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A3P43003 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A3P43003 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SLC1A3P43003 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A3P43003 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A3P43003 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A3P43003 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SLC1A3P43003 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A3P43003 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A3P43003 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC1A3P43003 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC1A3P43003 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
SLC1A3P43003 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A3P43003 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A3P43003 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC1A3P43003 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC1A3P43003 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A3P43003 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A3P43003 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC1A3P43003 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SLC1A3P43003 AC006455.2-201ENST00000429931 906 ntBASIC20.06■□□□□ 0.8
SLC1A3P43003 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A3P43003 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC1A3P43003 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC1A3P43003 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC1A3P43003 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A3P43003 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A3P43003 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A3P43003 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A3P43003 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A3P43003 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC1A3P43003 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC1A3P43003 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
SLC1A3P43003 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A3P43003 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SLC1A3P43003 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC1A3P43003 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC1A3P43003 MIR4466-201ENST00000606121 54 ntBASIC20.05■□□□□ 0.8
SLC1A3P43003 AC131212.1-201ENST00000613771 668 ntBASIC20.05■□□□□ 0.8
SLC1A3P43003 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.05■□□□□ 0.8
SLC1A3P43003 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC1A3P43003 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A3P43003 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC1A3P43003 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A3P43003 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC1A3P43003 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC1A3P43003 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A3P43003 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC1A3P43003 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A3P43003 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A3P43003 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms