Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CXCL5P42830 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CXCL5P42830 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CXCL5P42830 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CXCL5P42830 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CXCL5P42830 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CXCL5P42830 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CXCL5P42830 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CXCL5P42830 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CXCL5P42830 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CXCL5P42830 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CXCL5P42830 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CXCL5P42830 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CXCL5P42830 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CXCL5P42830 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.7□□□□□ -0.06
CXCL5P42830 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CXCL5P42830 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CXCL5P42830 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CXCL5P42830 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CXCL5P42830 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CXCL5P42830 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CXCL5P42830 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CXCL5P42830 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
CXCL5P42830 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CXCL5P42830 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC14.69□□□□□ -0.06
CXCL5P42830 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CXCL5P42830 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL5P42830 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL5P42830 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL5P42830 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL5P42830 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL5P42830 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CXCL5P42830 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL5P42830 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL5P42830 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL5P42830 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CXCL5P42830 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CXCL5P42830 BHLHE23-202ENST00000612929 1109 ntBASIC14.69□□□□□ -0.06
CXCL5P42830 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL5P42830 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL5P42830 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CXCL5P42830 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
CXCL5P42830 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.69□□□□□ -0.06
CXCL5P42830 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL5P42830 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CXCL5P42830 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
CXCL5P42830 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.69□□□□□ -0.06
CXCL5P42830 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 KRT18P60-201ENST00000312876 1297 ntBASIC14.68□□□□□ -0.06
CXCL5P42830 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.68□□□□□ -0.06
CXCL5P42830 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.68□□□□□ -0.06
CXCL5P42830 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.68□□□□□ -0.06
CXCL5P42830 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CXCL5P42830 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCL5P42830 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCL5P42830 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CXCL5P42830 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL5P42830 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CXCL5P42830 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL5P42830 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL5P42830 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CXCL5P42830 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CXCL5P42830 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCL5P42830 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL5P42830 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCL5P42830 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCL5P42830 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL5P42830 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCL5P42830 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL5P42830 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CXCL5P42830 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL5P42830 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CXCL5P42830 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL5P42830 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.67□□□□□ -0.06
CXCL5P42830 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCL5P42830 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCL5P42830 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCL5P42830 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CXCL5P42830 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CXCL5P42830 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCL5P42830 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CXCL5P42830 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL5P42830 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL5P42830 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL5P42830 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCL5P42830 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms