Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCKBRP32239 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.07■□□□□ 0.96
CCKBRP32239 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.06■□□□□ 0.96
CCKBRP32239 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CCKBRP32239 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCKBRP32239 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCKBRP32239 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCKBRP32239 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCKBRP32239 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.06■□□□□ 0.96
CCKBRP32239 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.06■□□□□ 0.96
CCKBRP32239 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCKBRP32239 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.06■□□□□ 0.96
CCKBRP32239 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.06■□□□□ 0.96
CCKBRP32239 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCKBRP32239 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCKBRP32239 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.06■□□□□ 0.96
CCKBRP32239 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCKBRP32239 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.06■□□□□ 0.96
CCKBRP32239 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.06■□□□□ 0.96
CCKBRP32239 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCKBRP32239 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCKBRP32239 BX005040.4-201ENST00000637145 1518 ntBASIC21.05■□□□□ 0.96
CCKBRP32239 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCKBRP32239 AC087239.1-201ENST00000622671 572 ntBASIC21.05■□□□□ 0.96
CCKBRP32239 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.05■□□□□ 0.96
CCKBRP32239 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCKBRP32239 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCKBRP32239 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCKBRP32239 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCKBRP32239 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCKBRP32239 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCKBRP32239 LINC01124-201ENST00000409786 2117 ntBASIC21.04■□□□□ 0.96
CCKBRP32239 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
CCKBRP32239 AC016769.1-201ENST00000409132 1010 ntBASIC21.04■□□□□ 0.96
CCKBRP32239 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.04■□□□□ 0.96
CCKBRP32239 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCKBRP32239 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.04■□□□□ 0.96
CCKBRP32239 AC137761.2-201ENST00000561729 223 ntBASIC21.04■□□□□ 0.96
CCKBRP32239 AC145350.3-201ENST00000569033 163 ntBASIC21.04■□□□□ 0.96
CCKBRP32239 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.04■□□□□ 0.96
CCKBRP32239 AC080038.1-201ENST00000611274 1154 ntBASIC21.04■□□□□ 0.96
CCKBRP32239 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCKBRP32239 AL139125.2-201ENST00000623134 1869 ntBASIC21.04■□□□□ 0.96
CCKBRP32239 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.04■□□□□ 0.96
CCKBRP32239 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCKBRP32239 AC079630.1-202ENST00000618127 1840 ntBASIC21.04■□□□□ 0.96
CCKBRP32239 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CCKBRP32239 AC004687.1-201ENST00000579003 1625 ntBASIC21.04■□□□□ 0.96
CCKBRP32239 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCKBRP32239 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCKBRP32239 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCKBRP32239 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.03■□□□□ 0.96
CCKBRP32239 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCKBRP32239 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.03■□□□□ 0.96
CCKBRP32239 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.03■□□□□ 0.96
CCKBRP32239 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCKBRP32239 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.03■□□□□ 0.96
CCKBRP32239 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCKBRP32239 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCKBRP32239 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCKBRP32239 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCKBRP32239 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCKBRP32239 AP004607.4-201ENST00000530158 1459 ntBASIC21.02■□□□□ 0.96
CCKBRP32239 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCKBRP32239 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.02■□□□□ 0.96
CCKBRP32239 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCKBRP32239 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCKBRP32239 AC010141.3-201ENST00000456659 717 ntBASIC21.02■□□□□ 0.96
CCKBRP32239 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCKBRP32239 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCKBRP32239 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCKBRP32239 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCKBRP32239 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.02■□□□□ 0.96
CCKBRP32239 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCKBRP32239 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCKBRP32239 LINC00543-201ENST00000567234 1845 ntBASIC21.01■□□□□ 0.95
CCKBRP32239 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCKBRP32239 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCKBRP32239 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCKBRP32239 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.01■□□□□ 0.95
CCKBRP32239 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.01■□□□□ 0.95
CCKBRP32239 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.01■□□□□ 0.95
CCKBRP32239 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCKBRP32239 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.01■□□□□ 0.95
CCKBRP32239 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.01■□□□□ 0.95
CCKBRP32239 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCKBRP32239 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCKBRP32239 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCKBRP32239 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCKBRP32239 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCKBRP32239 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCKBRP32239 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21■□□□□ 0.95
CCKBRP32239 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21■□□□□ 0.95
CCKBRP32239 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CCKBRP32239 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCKBRP32239 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21■□□□□ 0.95
CCKBRP32239 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21■□□□□ 0.95
CCKBRP32239 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21■□□□□ 0.95
CCKBRP32239 DBI-210ENST00000542275 757 ntTSL 5 BASIC21■□□□□ 0.95
CCKBRP32239 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms