Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
MMP11P24347 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.79■□□□□ 0.92
MMP11P24347 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.79■□□□□ 0.92
MMP11P24347 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
MMP11P24347 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.79■□□□□ 0.92
MMP11P24347 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP11P24347 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP11P24347 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MMP11P24347 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP11P24347 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MMP11P24347 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
MMP11P24347 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP11P24347 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MMP11P24347 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
MMP11P24347 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MMP11P24347 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
MMP11P24347 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MMP11P24347 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP11P24347 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP11P24347 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MMP11P24347 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.78■□□□□ 0.92
MMP11P24347 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP11P24347 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.78■□□□□ 0.92
MMP11P24347 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP11P24347 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP11P24347 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MMP11P24347 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
MMP11P24347 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
MMP11P24347 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP11P24347 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
MMP11P24347 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
MMP11P24347 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
MMP11P24347 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MMP11P24347 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.77■□□□□ 0.92
MMP11P24347 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP11P24347 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.77■□□□□ 0.92
MMP11P24347 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.77■□□□□ 0.92
MMP11P24347 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.77■□□□□ 0.92
MMP11P24347 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MMP11P24347 AC087623.3-201ENST00000607047 1098 ntBASIC20.77■□□□□ 0.92
MMP11P24347 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.77■□□□□ 0.92
MMP11P24347 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MMP11P24347 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.77■□□□□ 0.92
MMP11P24347 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
MMP11P24347 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.77■□□□□ 0.91
MMP11P24347 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP11P24347 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP11P24347 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MMP11P24347 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP11P24347 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP11P24347 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MMP11P24347 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.76■□□□□ 0.91
MMP11P24347 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP11P24347 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP11P24347 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
MMP11P24347 AC010525.1-201ENST00000585559 441 ntBASIC20.76■□□□□ 0.91
MMP11P24347 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP11P24347 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP11P24347 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP11P24347 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.75■□□□□ 0.91
MMP11P24347 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.75■□□□□ 0.91
MMP11P24347 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP11P24347 C1orf229-201ENST00000623686 2258 ntBASIC20.75■□□□□ 0.91
MMP11P24347 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.75■□□□□ 0.91
MMP11P24347 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.75■□□□□ 0.91
MMP11P24347 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP11P24347 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MMP11P24347 AC104564.3-201ENST00000582367 638 ntBASIC20.75■□□□□ 0.91
MMP11P24347 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.75■□□□□ 0.91
MMP11P24347 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.75■□□□□ 0.91
MMP11P24347 AC092666.2-201ENST00000613287 246 ntBASIC20.75■□□□□ 0.91
MMP11P24347 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP11P24347 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
MMP11P24347 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.75■□□□□ 0.91
MMP11P24347 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP11P24347 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP11P24347 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
MMP11P24347 MIR572-201ENST00000384983 95 ntBASIC20.74■□□□□ 0.91
MMP11P24347 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP11P24347 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP11P24347 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
MMP11P24347 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
MMP11P24347 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP11P24347 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
MMP11P24347 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.73■□□□□ 0.91
MMP11P24347 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP11P24347 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP11P24347 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP11P24347 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.73■□□□□ 0.91
MMP11P24347 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MMP11P24347 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MMP11P24347 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.73■□□□□ 0.91
MMP11P24347 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.73■□□□□ 0.91
MMP11P24347 AL358852.1-201ENST00000623174 1268 ntBASIC20.73■□□□□ 0.91
MMP11P24347 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MMP11P24347 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MMP11P24347 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP11P24347 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP11P24347 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP11P24347 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms