Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.2■□□□□ 0.82
NR4A1P22736 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NR4A1P22736 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NR4A1P22736 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NR4A1P22736 Z92544.1-202ENST00000571933 1220 ntBASIC20.2■□□□□ 0.82
NR4A1P22736 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.2■□□□□ 0.82
NR4A1P22736 MIR4281-201ENST00000580852 62 ntBASIC20.2■□□□□ 0.82
NR4A1P22736 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.2■□□□□ 0.82
NR4A1P22736 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NR4A1P22736 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NR4A1P22736 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NR4A1P22736 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NR4A1P22736 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NR4A1P22736 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR4A1P22736 AC092667.1-201ENST00000434301 2586 ntBASIC20.19■□□□□ 0.82
NR4A1P22736 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.19■□□□□ 0.82
NR4A1P22736 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NR4A1P22736 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NR4A1P22736 AC137630.3-201ENST00000607245 391 ntBASIC20.19■□□□□ 0.82
NR4A1P22736 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR4A1P22736 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NR4A1P22736 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NR4A1P22736 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.19■□□□□ 0.82
NR4A1P22736 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR4A1P22736 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NR4A1P22736 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR4A1P22736 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.18■□□□□ 0.82
NR4A1P22736 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR4A1P22736 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NR4A1P22736 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR4A1P22736 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
NR4A1P22736 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR4A1P22736 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR4A1P22736 BX664725.1-201ENST00000438252 379 ntBASIC20.18■□□□□ 0.82
NR4A1P22736 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
NR4A1P22736 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR4A1P22736 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR4A1P22736 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.18■□□□□ 0.82
NR4A1P22736 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NR4A1P22736 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NR4A1P22736 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR4A1P22736 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR4A1P22736 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR4A1P22736 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NR4A1P22736 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR4A1P22736 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.17■□□□□ 0.82
NR4A1P22736 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NR4A1P22736 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.17■□□□□ 0.82
NR4A1P22736 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR4A1P22736 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NR4A1P22736 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.17■□□□□ 0.82
NR4A1P22736 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR4A1P22736 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NR4A1P22736 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR4A1P22736 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.17■□□□□ 0.82
NR4A1P22736 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.17■□□□□ 0.82
NR4A1P22736 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NR4A1P22736 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NR4A1P22736 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
NR4A1P22736 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NR4A1P22736 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NR4A1P22736 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NR4A1P22736 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NR4A1P22736 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
NR4A1P22736 AC239859.2-201ENST00000444165 318 ntBASIC20.16■□□□□ 0.82
NR4A1P22736 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.16■□□□□ 0.82
NR4A1P22736 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.16■□□□□ 0.82
NR4A1P22736 AC005229.4-201ENST00000610085 2198 ntBASIC20.16■□□□□ 0.82
NR4A1P22736 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.16■□□□□ 0.82
NR4A1P22736 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NR4A1P22736 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NR4A1P22736 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR4A1P22736 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NR4A1P22736 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.15■□□□□ 0.82
NR4A1P22736 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NR4A1P22736 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NR4A1P22736 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.15■□□□□ 0.82
NR4A1P22736 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NR4A1P22736 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR4A1P22736 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR4A1P22736 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.15■□□□□ 0.82
NR4A1P22736 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NR4A1P22736 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR4A1P22736 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NR4A1P22736 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.14■□□□□ 0.81
NR4A1P22736 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR4A1P22736 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NR4A1P22736 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.14■□□□□ 0.81
NR4A1P22736 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NR4A1P22736 KRT125P-201ENST00000546827 989 ntBASIC20.14■□□□□ 0.81
NR4A1P22736 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR4A1P22736 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR4A1P22736 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR4A1P22736 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR4A1P22736 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NR4A1P22736 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.14■□□□□ 0.81
NR4A1P22736 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR4A1P22736 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR4A1P22736 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR4A1P22736 AL391422.3-201ENST00000603791 2761 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms