Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CAPN1P07384 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CAPN1P07384 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CAPN1P07384 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CAPN1P07384 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CAPN1P07384 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CAPN1P07384 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CAPN1P07384 AC242852.2-201ENST00000615738 1807 ntBASIC21.48■■□□□ 1.03
CAPN1P07384 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CAPN1P07384 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.47■■□□□ 1.03
CAPN1P07384 LINC00565-201ENST00000562710 2331 ntBASIC21.47■■□□□ 1.03
CAPN1P07384 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
CAPN1P07384 AC127496.7-201ENST00000625110 1798 ntBASIC21.47■■□□□ 1.03
CAPN1P07384 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPN1P07384 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CAPN1P07384 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPN1P07384 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPN1P07384 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CAPN1P07384 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPN1P07384 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CAPN1P07384 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN1P07384 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN1P07384 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CAPN1P07384 EDA-201ENST00000338901 1233 ntBASIC21.46■■□□□ 1.03
CAPN1P07384 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN1P07384 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.46■■□□□ 1.03
CAPN1P07384 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN1P07384 DUX4L19-201ENST00000557448 1267 ntBASIC21.46■■□□□ 1.03
CAPN1P07384 AC142381.2-201ENST00000566120 298 ntBASIC21.46■■□□□ 1.03
CAPN1P07384 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.46■■□□□ 1.03
CAPN1P07384 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN1P07384 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.46■■□□□ 1.03
CAPN1P07384 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CAPN1P07384 FP325331.1-202ENST00000623531 1380 ntBASIC21.46■■□□□ 1.03
CAPN1P07384 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.46■■□□□ 1.03
CAPN1P07384 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN1P07384 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN1P07384 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
CAPN1P07384 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN1P07384 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN1P07384 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN1P07384 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN1P07384 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN1P07384 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.45■■□□□ 1.02
CAPN1P07384 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CAPN1P07384 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CAPN1P07384 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CAPN1P07384 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN1P07384 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN1P07384 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN1P07384 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN1P07384 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN1P07384 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CAPN1P07384 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN1P07384 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN1P07384 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN1P07384 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN1P07384 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN1P07384 ZNRF2P3-201ENST00000424200 374 ntBASIC21.44■■□□□ 1.02
CAPN1P07384 AL355001.2-201ENST00000620617 1191 ntBASIC21.44■■□□□ 1.02
CAPN1P07384 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CAPN1P07384 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN1P07384 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN1P07384 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.43■■□□□ 1.02
CAPN1P07384 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.43■■□□□ 1.02
CAPN1P07384 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN1P07384 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN1P07384 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.43■■□□□ 1.02
CAPN1P07384 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.43■■□□□ 1.02
CAPN1P07384 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.43■■□□□ 1.02
CAPN1P07384 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
CAPN1P07384 AC099791.2-201ENST00000605725 427 ntBASIC21.43■■□□□ 1.02
CAPN1P07384 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.43■■□□□ 1.02
CAPN1P07384 C17orf82-201ENST00000623772 1530 ntBASIC21.43■■□□□ 1.02
CAPN1P07384 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN1P07384 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CAPN1P07384 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN1P07384 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.43■■□□□ 1.02
CAPN1P07384 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN1P07384 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN1P07384 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN1P07384 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CAPN1P07384 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN1P07384 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN1P07384 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN1P07384 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN1P07384 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN1P07384 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN1P07384 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.42■■□□□ 1.02
CAPN1P07384 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CAPN1P07384 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CAPN1P07384 SYT6-210ENST00000641643 1587 ntBASIC21.42■■□□□ 1.02
CAPN1P07384 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN1P07384 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
CAPN1P07384 AC087742.1-201ENST00000575880 1738 ntBASIC21.41■■□□□ 1.02
CAPN1P07384 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN1P07384 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CAPN1P07384 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN1P07384 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CAPN1P07384 SERBP1P1-201ENST00000396021 1160 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms