Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.35■□□□□ 0.85
SOX30O94993 MIR3181-201ENST00000578512 73 ntBASIC20.35■□□□□ 0.85
SOX30O94993 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SOX30O94993 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.35■□□□□ 0.85
SOX30O94993 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX30O94993 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SOX30O94993 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX30O94993 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SOX30O94993 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX30O94993 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SOX30O94993 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX30O94993 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX30O94993 SYT6-210ENST00000641643 1587 ntBASIC20.34■□□□□ 0.85
SOX30O94993 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.34■□□□□ 0.85
SOX30O94993 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SOX30O94993 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.34■□□□□ 0.85
SOX30O94993 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SOX30O94993 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.34■□□□□ 0.85
SOX30O94993 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX30O94993 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SOX30O94993 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX30O94993 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SOX30O94993 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX30O94993 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX30O94993 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX30O94993 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX30O94993 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SOX30O94993 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.33■□□□□ 0.85
SOX30O94993 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SOX30O94993 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.33■□□□□ 0.85
SOX30O94993 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SOX30O94993 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.33■□□□□ 0.85
SOX30O94993 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.33■□□□□ 0.85
SOX30O94993 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.33■□□□□ 0.85
SOX30O94993 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SOX30O94993 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SOX30O94993 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.33■□□□□ 0.84
SOX30O94993 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SOX30O94993 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX30O94993 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.32■□□□□ 0.84
SOX30O94993 OR2I1P-207ENST00000453522 948 ntBASIC20.32■□□□□ 0.84
SOX30O94993 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SOX30O94993 AC011298.3-201ENST00000615796 283 ntBASIC20.32■□□□□ 0.84
SOX30O94993 AL031602.1-201ENST00000633169 911 ntBASIC20.32■□□□□ 0.84
SOX30O94993 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SOX30O94993 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SOX30O94993 AC008406.3-201ENST00000620001 1374 ntBASIC20.32■□□□□ 0.84
SOX30O94993 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX30O94993 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX30O94993 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX30O94993 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.31■□□□□ 0.84
SOX30O94993 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.31■□□□□ 0.84
SOX30O94993 AC006455.2-201ENST00000429931 906 ntBASIC20.31■□□□□ 0.84
SOX30O94993 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.31■□□□□ 0.84
SOX30O94993 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SOX30O94993 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX30O94993 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX30O94993 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX30O94993 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX30O94993 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX30O94993 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX30O94993 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX30O94993 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOX30O94993 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX30O94993 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX30O94993 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.3■□□□□ 0.84
SOX30O94993 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOX30O94993 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.3■□□□□ 0.84
SOX30O94993 MIR4466-201ENST00000606121 54 ntBASIC20.3■□□□□ 0.84
SOX30O94993 AC087239.1-201ENST00000622671 572 ntBASIC20.3■□□□□ 0.84
SOX30O94993 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SOX30O94993 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX30O94993 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.3■□□□□ 0.84
SOX30O94993 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SOX30O94993 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SOX30O94993 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX30O94993 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX30O94993 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX30O94993 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.29■□□□□ 0.84
SOX30O94993 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX30O94993 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SOX30O94993 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX30O94993 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX30O94993 AC131281.2-201ENST00000520478 145 ntBASIC20.29■□□□□ 0.84
SOX30O94993 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SOX30O94993 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SOX30O94993 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SOX30O94993 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX30O94993 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX30O94993 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX30O94993 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX30O94993 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX30O94993 LINC00526-201ENST00000581067 1875 ntBASIC20.28■□□□□ 0.84
SOX30O94993 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.28■□□□□ 0.84
SOX30O94993 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
SOX30O94993 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SOX30O94993 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SOX30O94993 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX30O94993 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX30O94993 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms