Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC9.95□□□□□ -0.82
USH2AO75445 AC012306.2-201ENST00000609350 630 ntBASIC9.95□□□□□ -0.82
USH2AO75445 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC9.95□□□□□ -0.82
USH2AO75445 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
USH2AO75445 KRT87P-202ENST00000534226 1464 ntBASIC9.95□□□□□ -0.82
USH2AO75445 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
USH2AO75445 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
USH2AO75445 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
USH2AO75445 SHF-207ENST00000560540 2062 ntTSL 5 BASIC9.95□□□□□ -0.82
USH2AO75445 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC9.94□□□□□ -0.82
USH2AO75445 AL022069.1-201ENST00000568025 1636 ntBASIC9.94□□□□□ -0.82
USH2AO75445 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC9.94□□□□□ -0.82
USH2AO75445 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC9.94□□□□□ -0.82
USH2AO75445 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC9.94□□□□□ -0.82
USH2AO75445 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC9.94□□□□□ -0.82
USH2AO75445 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
USH2AO75445 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
USH2AO75445 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
USH2AO75445 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC9.94□□□□□ -0.82
USH2AO75445 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC9.94□□□□□ -0.82
USH2AO75445 CPT2-209ENST00000636935 803 ntTSL 5 BASIC9.94□□□□□ -0.82
USH2AO75445 STX4-202ENST00000394998 1498 ntTSL 2 BASIC9.94□□□□□ -0.82
USH2AO75445 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
USH2AO75445 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
USH2AO75445 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
USH2AO75445 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
USH2AO75445 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
USH2AO75445 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
USH2AO75445 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
USH2AO75445 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
USH2AO75445 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
USH2AO75445 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC9.94□□□□□ -0.82
USH2AO75445 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
USH2AO75445 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC9.94□□□□□ -0.82
USH2AO75445 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
USH2AO75445 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
USH2AO75445 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
USH2AO75445 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
USH2AO75445 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
USH2AO75445 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC9.93□□□□□ -0.82
USH2AO75445 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
USH2AO75445 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
USH2AO75445 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
USH2AO75445 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC9.93□□□□□ -0.82
USH2AO75445 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
USH2AO75445 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC9.93□□□□□ -0.82
USH2AO75445 MKRN4P-201ENST00000444706 1521 ntBASIC9.93□□□□□ -0.82
USH2AO75445 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
USH2AO75445 AC079140.4-201ENST00000507448 529 ntBASIC9.93□□□□□ -0.82
USH2AO75445 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC9.93□□□□□ -0.82
USH2AO75445 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
USH2AO75445 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
USH2AO75445 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC9.93□□□□□ -0.82
USH2AO75445 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC9.93□□□□□ -0.82
USH2AO75445 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
USH2AO75445 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC9.93□□□□□ -0.82
USH2AO75445 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
USH2AO75445 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
USH2AO75445 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
USH2AO75445 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
USH2AO75445 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
USH2AO75445 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
USH2AO75445 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
USH2AO75445 AC026366.1-201ENST00000488803 879 ntBASIC9.92□□□□□ -0.82
USH2AO75445 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC9.92□□□□□ -0.82
USH2AO75445 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC9.92□□□□□ -0.82
USH2AO75445 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
USH2AO75445 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
USH2AO75445 CYP2T1P-201ENST00000432607 1285 ntBASIC9.92□□□□□ -0.82
USH2AO75445 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC9.92□□□□□ -0.82
USH2AO75445 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
USH2AO75445 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
USH2AO75445 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
USH2AO75445 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
USH2AO75445 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
USH2AO75445 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
USH2AO75445 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
USH2AO75445 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
USH2AO75445 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
USH2AO75445 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
USH2AO75445 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC9.92□□□□□ -0.82
USH2AO75445 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
USH2AO75445 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC9.92□□□□□ -0.82
USH2AO75445 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
USH2AO75445 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC9.92□□□□□ -0.82
USH2AO75445 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC9.92□□□□□ -0.82
USH2AO75445 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
USH2AO75445 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC9.92□□□□□ -0.82
USH2AO75445 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
USH2AO75445 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC9.91□□□□□ -0.82
USH2AO75445 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
USH2AO75445 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
USH2AO75445 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
USH2AO75445 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
USH2AO75445 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
USH2AO75445 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
USH2AO75445 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
USH2AO75445 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
USH2AO75445 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
USH2AO75445 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms