Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CNOT3O75175 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CNOT3O75175 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT3O75175 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
CNOT3O75175 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT3O75175 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CNOT3O75175 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT3O75175 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CNOT3O75175 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CNOT3O75175 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNOT3O75175 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNOT3O75175 AL117328.2-201ENST00000624617 1940 ntBASIC21.08■□□□□ 0.97
CNOT3O75175 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CNOT3O75175 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.08■□□□□ 0.97
CNOT3O75175 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.08■□□□□ 0.97
CNOT3O75175 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CNOT3O75175 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNOT3O75175 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNOT3O75175 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT3O75175 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT3O75175 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.07■□□□□ 0.96
CNOT3O75175 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.07■□□□□ 0.96
CNOT3O75175 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.07■□□□□ 0.96
CNOT3O75175 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT3O75175 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNOT3O75175 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CNOT3O75175 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT3O75175 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT3O75175 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT3O75175 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT3O75175 BX842568.3-201ENST00000418104 571 ntBASIC21.06■□□□□ 0.96
CNOT3O75175 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.06■□□□□ 0.96
CNOT3O75175 AL121603.2-201ENST00000557373 2117 ntBASIC21.06■□□□□ 0.96
CNOT3O75175 AC233992.3-201ENST00000607491 485 ntBASIC21.06■□□□□ 0.96
CNOT3O75175 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT3O75175 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CNOT3O75175 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT3O75175 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT3O75175 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CNOT3O75175 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT3O75175 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT3O75175 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CNOT3O75175 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
CNOT3O75175 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.05■□□□□ 0.96
CNOT3O75175 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT3O75175 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CNOT3O75175 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT3O75175 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT3O75175 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CNOT3O75175 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.05■□□□□ 0.96
CNOT3O75175 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.05■□□□□ 0.96
CNOT3O75175 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT3O75175 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT3O75175 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT3O75175 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT3O75175 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.04■□□□□ 0.96
CNOT3O75175 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT3O75175 LINC00565-201ENST00000562710 2331 ntBASIC21.04■□□□□ 0.96
CNOT3O75175 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT3O75175 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT3O75175 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.04■□□□□ 0.96
CNOT3O75175 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.04■□□□□ 0.96
CNOT3O75175 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT3O75175 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CNOT3O75175 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT3O75175 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT3O75175 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT3O75175 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT3O75175 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT3O75175 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT3O75175 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT3O75175 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CNOT3O75175 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CNOT3O75175 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT3O75175 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CNOT3O75175 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CNOT3O75175 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT3O75175 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.03■□□□□ 0.96
CNOT3O75175 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT3O75175 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT3O75175 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.02■□□□□ 0.96
CNOT3O75175 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.02■□□□□ 0.96
CNOT3O75175 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CNOT3O75175 SLC47A1P1-202ENST00000449666 945 ntBASIC21.02■□□□□ 0.96
CNOT3O75175 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT3O75175 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT3O75175 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CNOT3O75175 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.02■□□□□ 0.95
CNOT3O75175 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CNOT3O75175 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT3O75175 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT3O75175 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.01■□□□□ 0.95
CNOT3O75175 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT3O75175 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT3O75175 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.01■□□□□ 0.95
CNOT3O75175 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT3O75175 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.01■□□□□ 0.95
CNOT3O75175 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT3O75175 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT3O75175 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms