Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GSC2O15499 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
GSC2O15499 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
GSC2O15499 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GSC2O15499 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.08■□□□□ 0.96
GSC2O15499 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.08■□□□□ 0.96
GSC2O15499 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
GSC2O15499 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
GSC2O15499 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
GSC2O15499 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
GSC2O15499 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GSC2O15499 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
GSC2O15499 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.07■□□□□ 0.96
GSC2O15499 AC016575.1-201ENST00000607026 382 ntBASIC21.07■□□□□ 0.96
GSC2O15499 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GSC2O15499 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GSC2O15499 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GSC2O15499 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GSC2O15499 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GSC2O15499 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
GSC2O15499 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.06■□□□□ 0.96
GSC2O15499 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.06■□□□□ 0.96
GSC2O15499 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
GSC2O15499 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.06■□□□□ 0.96
GSC2O15499 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.06■□□□□ 0.96
GSC2O15499 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
GSC2O15499 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GSC2O15499 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
GSC2O15499 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GSC2O15499 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.05■□□□□ 0.96
GSC2O15499 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GSC2O15499 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
GSC2O15499 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GSC2O15499 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GSC2O15499 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GSC2O15499 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GSC2O15499 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GSC2O15499 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
GSC2O15499 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
GSC2O15499 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GSC2O15499 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
GSC2O15499 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.04■□□□□ 0.96
GSC2O15499 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
GSC2O15499 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GSC2O15499 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GSC2O15499 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
GSC2O15499 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
GSC2O15499 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
GSC2O15499 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.03■□□□□ 0.96
GSC2O15499 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GSC2O15499 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
GSC2O15499 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GSC2O15499 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GSC2O15499 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GSC2O15499 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
GSC2O15499 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.02■□□□□ 0.96
GSC2O15499 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.02■□□□□ 0.96
GSC2O15499 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
GSC2O15499 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GSC2O15499 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
GSC2O15499 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.02■□□□□ 0.96
GSC2O15499 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GSC2O15499 AC022413.1-201ENST00000624602 984 ntBASIC21.02■□□□□ 0.96
GSC2O15499 AC144652.1-201ENST00000609974 1624 ntBASIC21.02■□□□□ 0.96
GSC2O15499 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.02■□□□□ 0.96
GSC2O15499 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
GSC2O15499 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
GSC2O15499 AC007952.6-201ENST00000573168 2673 ntBASIC21.01■□□□□ 0.95
GSC2O15499 AC003957.1-201ENST00000625108 2673 ntBASIC21.01■□□□□ 0.95
GSC2O15499 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GSC2O15499 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GSC2O15499 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
GSC2O15499 LINC01006-201ENST00000333319 2292 ntBASIC21.01■□□□□ 0.95
GSC2O15499 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.01■□□□□ 0.95
GSC2O15499 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.01■□□□□ 0.95
GSC2O15499 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
GSC2O15499 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GSC2O15499 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GSC2O15499 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GSC2O15499 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
GSC2O15499 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GSC2O15499 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
GSC2O15499 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms