Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP2A1O14983 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ATP2A1O14983 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.23■■□□□ 1.63
ATP2A1O14983 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ATP2A1O14983 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
ATP2A1O14983 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ATP2A1O14983 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ATP2A1O14983 KRT18P61-201ENST00000585825 1298 ntBASIC25.23■■□□□ 1.63
ATP2A1O14983 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.23■■□□□ 1.63
ATP2A1O14983 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.23■■□□□ 1.63
ATP2A1O14983 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
ATP2A1O14983 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.23■■□□□ 1.63
ATP2A1O14983 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ATP2A1O14983 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ATP2A1O14983 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ATP2A1O14983 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
ATP2A1O14983 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.22■■□□□ 1.63
ATP2A1O14983 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.22■■□□□ 1.63
ATP2A1O14983 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.22■■□□□ 1.63
ATP2A1O14983 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ATP2A1O14983 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.22■■□□□ 1.63
ATP2A1O14983 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
ATP2A1O14983 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
ATP2A1O14983 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.21■■□□□ 1.63
ATP2A1O14983 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ATP2A1O14983 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ATP2A1O14983 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ATP2A1O14983 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.21■■□□□ 1.63
ATP2A1O14983 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.21■■□□□ 1.63
ATP2A1O14983 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
ATP2A1O14983 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.21■■□□□ 1.63
ATP2A1O14983 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.21■■□□□ 1.63
ATP2A1O14983 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.21■■□□□ 1.63
ATP2A1O14983 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
ATP2A1O14983 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
ATP2A1O14983 OXCT2P1-201ENST00000447263 1535 ntBASIC25.21■■□□□ 1.63
ATP2A1O14983 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
ATP2A1O14983 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.2■■□□□ 1.63
ATP2A1O14983 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.2■■□□□ 1.62
ATP2A1O14983 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.2■■□□□ 1.62
ATP2A1O14983 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
ATP2A1O14983 AC004911.1-201ENST00000416316 871 ntBASIC25.2■■□□□ 1.62
ATP2A1O14983 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.2■■□□□ 1.62
ATP2A1O14983 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.2■■□□□ 1.62
ATP2A1O14983 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.2■■□□□ 1.62
ATP2A1O14983 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.2■■□□□ 1.62
ATP2A1O14983 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.2■■□□□ 1.62
ATP2A1O14983 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.2■■□□□ 1.62
ATP2A1O14983 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.2■■□□□ 1.62
ATP2A1O14983 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.19■■□□□ 1.62
ATP2A1O14983 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ATP2A1O14983 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
ATP2A1O14983 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.19■■□□□ 1.62
ATP2A1O14983 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
ATP2A1O14983 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
ATP2A1O14983 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
ATP2A1O14983 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
ATP2A1O14983 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
ATP2A1O14983 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
ATP2A1O14983 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.18■■□□□ 1.62
ATP2A1O14983 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
ATP2A1O14983 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ATP2A1O14983 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ATP2A1O14983 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ATP2A1O14983 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.17■■□□□ 1.62
ATP2A1O14983 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
ATP2A1O14983 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
ATP2A1O14983 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
ATP2A1O14983 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ATP2A1O14983 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
ATP2A1O14983 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.16■■□□□ 1.62
ATP2A1O14983 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.16■■□□□ 1.62
ATP2A1O14983 AC006015.1-201ENST00000429970 570 ntBASIC25.16■■□□□ 1.62
ATP2A1O14983 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.16■■□□□ 1.62
ATP2A1O14983 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.16■■□□□ 1.62
ATP2A1O14983 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
ATP2A1O14983 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ATP2A1O14983 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
ATP2A1O14983 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.16■■□□□ 1.62
ATP2A1O14983 DUSP8P3-201ENST00000399571 1760 ntBASIC25.16■■□□□ 1.62
ATP2A1O14983 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ATP2A1O14983 AP004607.4-201ENST00000530158 1459 ntBASIC25.15■■□□□ 1.62
ATP2A1O14983 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ATP2A1O14983 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ATP2A1O14983 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ATP2A1O14983 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ATP2A1O14983 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.15■■□□□ 1.62
ATP2A1O14983 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.15■■□□□ 1.62
ATP2A1O14983 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.15■■□□□ 1.62
ATP2A1O14983 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
ATP2A1O14983 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ATP2A1O14983 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ATP2A1O14983 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ATP2A1O14983 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.14■■□□□ 1.62
ATP2A1O14983 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ATP2A1O14983 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.14■■□□□ 1.62
ATP2A1O14983 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ATP2A1O14983 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.14■■□□□ 1.62
ATP2A1O14983 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
ATP2A1O14983 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.14■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms