Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH17O14917 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDH17O14917 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCDH17O14917 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCDH17O14917 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH17O14917 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH17O14917 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH17O14917 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PCDH17O14917 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH17O14917 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH17O14917 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH17O14917 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH17O14917 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH17O14917 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH17O14917 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH17O14917 AC026271.2-201ENST00000428091 497 ntBASIC20.86■□□□□ 0.93
PCDH17O14917 AC105265.2-201ENST00000467189 838 ntBASIC20.86■□□□□ 0.93
PCDH17O14917 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDH17O14917 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDH17O14917 AC008764.7-201ENST00000593779 1081 ntBASIC20.86■□□□□ 0.93
PCDH17O14917 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
PCDH17O14917 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH17O14917 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH17O14917 LINC00565-201ENST00000562710 2331 ntBASIC20.86■□□□□ 0.93
PCDH17O14917 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH17O14917 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH17O14917 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PCDH17O14917 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH17O14917 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH17O14917 AC133637.1-201ENST00000624115 1537 ntBASIC20.85■□□□□ 0.93
PCDH17O14917 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH17O14917 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH17O14917 AC099791.1-201ENST00000416440 715 ntBASIC20.85■□□□□ 0.93
PCDH17O14917 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDH17O14917 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDH17O14917 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PCDH17O14917 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH17O14917 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH17O14917 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH17O14917 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH17O14917 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH17O14917 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCDH17O14917 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH17O14917 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH17O14917 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH17O14917 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH17O14917 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCDH17O14917 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH17O14917 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH17O14917 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH17O14917 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH17O14917 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH17O14917 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH17O14917 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH17O14917 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH17O14917 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH17O14917 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH17O14917 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH17O14917 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCDH17O14917 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH17O14917 OR2I1P-207ENST00000453522 948 ntBASIC20.83■□□□□ 0.93
PCDH17O14917 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PCDH17O14917 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH17O14917 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH17O14917 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH17O14917 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH17O14917 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH17O14917 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH17O14917 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH17O14917 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH17O14917 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH17O14917 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH17O14917 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH17O14917 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH17O14917 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.82■□□□□ 0.92
PCDH17O14917 GUSBP5-202ENST00000510805 1989 ntBASIC20.82■□□□□ 0.92
PCDH17O14917 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PCDH17O14917 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH17O14917 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH17O14917 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
PCDH17O14917 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH17O14917 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDH17O14917 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH17O14917 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH17O14917 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
PCDH17O14917 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDH17O14917 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH17O14917 AC092666.2-201ENST00000613287 246 ntBASIC20.81■□□□□ 0.92
PCDH17O14917 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.81■□□□□ 0.92
PCDH17O14917 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDH17O14917 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDH17O14917 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PCDH17O14917 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDH17O14917 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH17O14917 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH17O14917 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH17O14917 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH17O14917 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH17O14917 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH17O14917 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms