Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TSPAN4O14817 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN4O14817 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN4O14817 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN4O14817 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.21■□□□□ 0.51
TSPAN4O14817 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN4O14817 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.21■□□□□ 0.51
TSPAN4O14817 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSPAN4O14817 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
TSPAN4O14817 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TSPAN4O14817 FBXW4P1-201ENST00000426721 2239 ntBASIC18.21■□□□□ 0.5
TSPAN4O14817 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN4O14817 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.2■□□□□ 0.5
TSPAN4O14817 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.2■□□□□ 0.5
TSPAN4O14817 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN4O14817 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TSPAN4O14817 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN4O14817 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN4O14817 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN4O14817 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN4O14817 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.2■□□□□ 0.5
TSPAN4O14817 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TSPAN4O14817 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN4O14817 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN4O14817 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN4O14817 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TSPAN4O14817 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.2■□□□□ 0.5
TSPAN4O14817 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN4O14817 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
TSPAN4O14817 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.2■□□□□ 0.5
TSPAN4O14817 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TSPAN4O14817 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN4O14817 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.2■□□□□ 0.5
TSPAN4O14817 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN4O14817 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSPAN4O14817 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN4O14817 AC026310.3-201ENST00000625186 2373 ntBASIC18.19■□□□□ 0.5
TSPAN4O14817 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN4O14817 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN4O14817 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TSPAN4O14817 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN4O14817 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
TSPAN4O14817 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN4O14817 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TSPAN4O14817 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
TSPAN4O14817 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN4O14817 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN4O14817 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN4O14817 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.19■□□□□ 0.5
TSPAN4O14817 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN4O14817 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN4O14817 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN4O14817 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSPAN4O14817 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TSPAN4O14817 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN4O14817 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TSPAN4O14817 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TSPAN4O14817 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN4O14817 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.18■□□□□ 0.5
TSPAN4O14817 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN4O14817 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN4O14817 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN4O14817 AL592293.1-201ENST00000502889 1188 ntBASIC18.18■□□□□ 0.5
TSPAN4O14817 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN4O14817 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSPAN4O14817 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TSPAN4O14817 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TSPAN4O14817 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TSPAN4O14817 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.17■□□□□ 0.5
TSPAN4O14817 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN4O14817 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN4O14817 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN4O14817 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.17■□□□□ 0.5
TSPAN4O14817 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN4O14817 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
TSPAN4O14817 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TSPAN4O14817 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.17■□□□□ 0.5
TSPAN4O14817 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN4O14817 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN4O14817 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN4O14817 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN4O14817 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSPAN4O14817 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TSPAN4O14817 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.17■□□□□ 0.5
TSPAN4O14817 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.16■□□□□ 0.5
TSPAN4O14817 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN4O14817 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TSPAN4O14817 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN4O14817 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN4O14817 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN4O14817 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TSPAN4O14817 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN4O14817 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN4O14817 AC087289.5-201ENST00000586076 3175 ntBASIC18.16■□□□□ 0.5
TSPAN4O14817 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TSPAN4O14817 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN4O14817 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN4O14817 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TSPAN4O14817 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSPAN4O14817 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms