Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.19■■□□□ 1.3
CLDN5O00501 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.18■■□□□ 1.3
CLDN5O00501 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.18■■□□□ 1.3
CLDN5O00501 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN5O00501 MIR572-201ENST00000384983 95 ntBASIC23.18■■□□□ 1.3
CLDN5O00501 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.18■■□□□ 1.3
CLDN5O00501 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.18■■□□□ 1.3
CLDN5O00501 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN5O00501 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CLDN5O00501 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CLDN5O00501 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN5O00501 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN5O00501 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CLDN5O00501 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
CLDN5O00501 LINC01960-201ENST00000563759 1884 ntBASIC23.17■■□□□ 1.3
CLDN5O00501 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN5O00501 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.17■■□□□ 1.3
CLDN5O00501 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN5O00501 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN5O00501 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CLDN5O00501 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN5O00501 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.17■■□□□ 1.3
CLDN5O00501 RARRES2P6-201ENST00000567333 442 ntBASIC23.17■■□□□ 1.3
CLDN5O00501 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CLDN5O00501 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN5O00501 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CLDN5O00501 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN5O00501 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.16■■□□□ 1.3
CLDN5O00501 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.16■■□□□ 1.3
CLDN5O00501 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN5O00501 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN5O00501 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.16■■□□□ 1.3
CLDN5O00501 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN5O00501 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN5O00501 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN5O00501 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN5O00501 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.16■■□□□ 1.3
CLDN5O00501 MIR6084-201ENST00000622012 110 ntBASIC23.16■■□□□ 1.3
CLDN5O00501 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
CLDN5O00501 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN5O00501 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.15■■□□□ 1.3
CLDN5O00501 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CLDN5O00501 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN5O00501 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN5O00501 AC026271.2-201ENST00000428091 497 ntBASIC23.15■■□□□ 1.3
CLDN5O00501 AC010141.3-201ENST00000456659 717 ntBASIC23.15■■□□□ 1.3
CLDN5O00501 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.15■■□□□ 1.3
CLDN5O00501 AC068587.7-201ENST00000641602 218 ntBASIC23.15■■□□□ 1.3
CLDN5O00501 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN5O00501 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.15■■□□□ 1.3
CLDN5O00501 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.15■■□□□ 1.3
CLDN5O00501 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN5O00501 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.15■■□□□ 1.3
CLDN5O00501 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.14■■□□□ 1.3
CLDN5O00501 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.14■■□□□ 1.3
CLDN5O00501 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
CLDN5O00501 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CLDN5O00501 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
CLDN5O00501 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.14■■□□□ 1.29
CLDN5O00501 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CLDN5O00501 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN5O00501 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN5O00501 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN5O00501 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN5O00501 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.13■■□□□ 1.29
CLDN5O00501 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CLDN5O00501 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN5O00501 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.13■■□□□ 1.29
CLDN5O00501 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.13■■□□□ 1.29
CLDN5O00501 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.13■■□□□ 1.29
CLDN5O00501 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.13■■□□□ 1.29
CLDN5O00501 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.13■■□□□ 1.29
CLDN5O00501 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN5O00501 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN5O00501 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CLDN5O00501 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN5O00501 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN5O00501 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.13■■□□□ 1.29
CLDN5O00501 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN5O00501 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN5O00501 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN5O00501 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN5O00501 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN5O00501 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.12■■□□□ 1.29
CLDN5O00501 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN5O00501 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.12■■□□□ 1.29
CLDN5O00501 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.12■■□□□ 1.29
CLDN5O00501 AC012414.1-201ENST00000556676 535 ntBASIC23.12■■□□□ 1.29
CLDN5O00501 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.12■■□□□ 1.29
CLDN5O00501 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.12■■□□□ 1.29
CLDN5O00501 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CLDN5O00501 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.12■■□□□ 1.29
CLDN5O00501 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CLDN5O00501 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN5O00501 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN5O00501 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN5O00501 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CLDN5O00501 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
CLDN5O00501 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
CLDN5O00501 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms